Salvelinus namaycush (lake trout): 120056022
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Entry
120056022 CDS
T07522
Name
(RefSeq) transcription factor E2-alpha-like isoform X1
KO
K09063
transcription factor E2-alpha
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120056022
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
120056022
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GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
120056022
NCBI-ProteinID:
XP_038860079
UniProt:
A0A8U1EIX2
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Position
Sna11:32082892..32130808
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AA seq
649 aa
AA seq
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MATVGTDKELSDLLDFSAMFAPPVLNGKNRPTTLASSQFGGTGMDERSGSTPWASGEQNS
PSFNQGRGYGEGTHYNEHECLASTPMFGSGIVGKAERGPYSSFGAQPGFMPSEMPMPSPD
ALSPSGLKSGSQFYPSQFNPRRRSTQESMDGQPKKIRKVPPGLPSSVYASASGEDYNRDG
AGYPASKPGNVGYPGSFYMQEGLHPSPDPWSSAGPMGQPGYSAVLGNSPHLGQPAPFTAI
NPQDRLKRQPLPLSPQNYPLHGSEVNGSFHPGSTGYGVPNHTPPINGTDSIMANRGTAPP
SSGDEIGKALASIYPSDHNSNTFPSSPSTPVGSPQAIAGSASQWSRGSGQATPSPNFEGG
LQALQNKMEDRLEEAIHVLQRHAGGQGGPGGLTDMHSLLSAGIGGLAQAFNNAGLGLARL
PNLMSNHHEDSAGPPSSGPGLHGHHGPPSAQPGSQPEGFTSLSRSTHSSSGADIKREDKE
DDENSSVADKSEDEKKDSKSRPRTRETFSFQTFSSSLSDTGADHDDEDEDDEDLPPELKK
EREKERRVANNARERLRVRDINEAFKELGRMCQLHLTNEKPQTKLLILHQAVNVILNLEQ
QVRERNLNPKAACLKRREEEKVSGVDPQMQMGGGHPGLGGDGHNSVNHM
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtggggacagacaaggagctcagtgacctgctggatttcagcgcgatgttt
gcaccgccggtgttgaatgggaagaacaggcccaccactctagccagcagccagttcgga
ggcactggtatggatgagcgaagcggttctaccccctgggcatctggagaacagaacagc
ccttccttcaaccagggacggggttatggtgaaggaactcattacaatgagcatgaatgc
ctggcttccacccctatgttcggctcaggaattgtgggcaaagctgagcgaggaccctac
tcttcttttggagcacagccgggctttatgcccagtgagatgcccatgcccagtcctgat
gccctgtccccctcgggtctgaagtctggctcccagttctacccctcccagttcaatcct
cgcaggagatccacccaggagagcatggatggccagccaaaaaagatcaggaaagttccc
cctggcctgccctcttcagtgtatgcgtcggcctcaggagaggactataacagagacggt
gcagggtatcctgcctccaagcctgggaacgtgggctaccccggctccttctatatgcaa
gaaggtctgcacccctcccctgacccgtggagttctgccgggccgatggggcagccgggc
tactctgctgtgctgggtaactcccctcacctgggccagcccgcccccttcaccgccatc
aacccccaggacagactgaagcgccagccgttgccactctcgccccagaactaccccctg
cacggcagcgaggtgaacgggagctttcaccctgggtccactggctacggagtccccaac
cacacaccccccatcaacggaacagacagcatcatggccaaccggggaacagctccacct
agctcaggagatgagatcggcaaagccctggcatcaatttatccttcggaccacaacagc
aacaccttcccttcatctccatctactccagtgggctctccccaggccatagcaggttct
gcctctcagtggtcccggggctcgggacaggccacaccctctccaaactttgagggagga
ctgcaggctctgcaaaacaaaatggaggaccgtctggaggaggcaatccacgttctgcag
cgccacgccgggggacaggggggcccaggggggctgactgacatgcacagcctcctcagc
gctgggataggaggtcttgcccaggccttcaacaacgctggcctgggactggccagactg
cccaacctgatgtccaaccaccatgaggactctgctggtccgccctctagtggtcctggt
ctgcatggtcaccatggccctccctcagcccagcctggcagccagcctgagggcttcacc
agcctctcccgctccacacactcgtccagtggcgccgacatcaaaagggaggacaaggag
gatgacgagaactcctccgtggctgacaagtcagaggacgagaagaaagactcgaagtcc
cgcccccgaacaagagagacgttctccttccagaccttctcttcctccctatcagacacg
ggagcagatcacgatgatgaggacgaggatgacgaggatctgccgccggagttgaagaaa
gagcgggagaaagagcggcgggtggcaaataatgcccgtgagcgtctgcgcgtgcgggac
atcaacgaagcctttaaggagctggggcgcatgtgtcagcttcacctgactaatgagaaa
ccccagaccaaactgctcattctgcaccaggccgttaatgttatactcaacctggagcag
caagtccgagagcgtaacctgaaccccaaggcagcgtgtctgaagcggagggaagaagag
aaggtttcgggggtggacccccagatgcagatgggaggggggcaccccgggttaggcggc
gatggacacaactctgtgaaccatatgtaa
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