KEGG   Salvelinus namaycush (lake trout): 120056711
Entry
120056711         CDS       T07522                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:snh04515]
    120056711
Cell adhesion molecules [BR:snh04515]
 Cadherins
  Protocadherins
   120056711
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th Cadherin_4
Other DBs
NCBI-GeneID: 120056711
NCBI-ProteinID: XP_038860843
UniProt: A0A8U1C277
LinkDB
Position
Sna12:39815693..39818272
AA seq 824 aa
MEQRTMRIRGNLRWQVLWIYQFVLLWNTIEAQIPYTIPEELKEGSVVGNIAKDLGLGISE
IYDRKLRIASDAGKQYFSVDLGKGELVVNKRIDREYLCGENVPCLLPLEVIVENPLQLHR
IEIEIQDINDNSPGFLTNERILNIAEVINPGAKFPLESAHDPDVGANSLRSYSISDNYHF
LLNIKTQGGQKIPELVLKTSLDREKQAVHKLVLTAVDGGTPARSGTSEITVIVLDVNDNE
PQFERPFYEIAVAENRPVGNQIVNVKASDSDEGQNGEIEYFFADQTPESIMALLNVDSNT
GEITIKGHLDYEQTNLHTFDIVAKDKGSPRMEGHCSVKINIADVNDNAPQIIITSLTSPI
PENSAPGMVIALISAKDLDVGENGKVTLNMSRGSPFTLKPSVSNHYALVTNGPLDRETFS
KYDVVIIAVDSGSPPLSTKKTVTVKILDVNDNPPVFSQTSYTVYVKENGTPGSILSSVSA
SDIDMGENAKISYSILDSKVQDVSVSSYIYINSDNGSIYSMHSFDYEKLKVFQIQVQAKD
HGSPSLSSNVTVHVFILDQNDNAPAVIYPSAVMGSVSHQKMPRSAKAGHLTTKISAVDAD
SGHNAWISYRLVEATDSSLFSVNLYTGEVRTKRAVSEQDDSSQRLLIEIQDNGEPVQSAT
VTVNILLEDGLHEPISDFRQKTAEPSKRNSKITFYLIISLASVSVLSLLTFLILVVKCVR
NSRSSSSCCIRRADSDGYKNPNRNLQLQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPVS
EFSDFTLVKPSSTTDFKDMINVLDASLPDSAWTFESQQVSAATL
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggaacaaaggacaatgaggattcgaggcaatttgaggtggcaagtgttatggatttat
caatttgttctcctgtggaatacaatagaggcgcagattccatacactatacctgaggag
ttaaaggaaggttctgttgttggaaatatagccaaggacctgggtttgggaatatctgag
atttatgaccgtaaactgaggatagcttctgacgctggtaagcagtatttcagtgtggat
ttgggaaagggtgagctggttgtcaataaaaggatagacagagaatatttatgtggagag
aacgtcccttgtttgttaccgctggaggttatagttgaaaatcccttacagctgcaccgc
attgaaatcgaaatacaggatataaatgataattctccaggttttcttacaaatgaacgc
attttgaatatagctgaggtgattaatccaggtgcaaaattcccattggaaagtgcacat
gatcctgacgtaggcgcaaactcattacggtcctatagtatcagtgataattaccatttc
ctgttgaacataaagactcagggaggccaaaaaatacccgaacttgtgctgaaaacttca
ctggacagagagaagcaggccgttcacaagctcgtgctcaccgcggtagacggggggact
cctgcacgatctggtacttctgaaatcaccgtcatagttcttgatgttaatgataatgag
ccccagtttgagagacctttttatgaaatagctgtagctgagaatagacccgttggcaat
cagattgtaaatgtaaaagcttccgattctgacgaaggacaaaatggagagatcgagtat
ttctttgcagaccagaccccagagagtataatggcattacttaatgttgactcaaatact
ggcgaaattactatcaaaggacatcttgattatgaacagacgaatttgcatacgtttgat
attgtggcaaaagataaaggcagtccacggatggaggggcactgtagtgtaaagatcaat
attgctgatgttaatgataatgcccctcaaattataataacctcactgaccagtccaata
ccggagaattccgcccctgggatggttattgcattgattagcgctaaagacttagacgtt
ggtgagaatggcaaagtaacgttaaacatgtcccggggttccccgttcactctgaagccc
tctgtttccaaccattacgcactggtgaccaacggcccgttagaccgagagacgttctcg
aagtatgatgttgtcattatcgcggttgattcagggtccccacctttatctacaaagaaa
accgttaccgtgaaaatcctagatgtcaatgacaatcctccagtgttttcccagacatcg
tatactgtttatgtcaaagaaaatggaaccccgggatctatactgagctcagtgtccgcc
tctgatatagacatgggtgagaatgcaaagatctcctattctatattagactctaaagta
caagacgtgtctgtctcgtcctatatttacataaactcagataacggcagcatctacagc
atgcactcgtttgactatgagaaactgaaggtgtttcagatacaggtccaggcaaaggac
cacggctctccgtctctgagcagcaacgtcacggttcatgtttttatcctggaccagaac
gacaatgcacccgctgttatttacccatccgctgtcatgggctcggtctcccatcagaag
atgccccggtccgctaaagcaggccacctcaccaccaagatatcggcagtggacgcagac
tcgggccataacgcctggatttcctataggctggtggaggccacagactcgtctctgttc
agtgtgaatctttacacaggggaggtgaggactaaacgcgctgtttcagagcaggatgac
tcctctcagaggctgcttatagagatacaggacaatggggaaccggtccagtccgccaca
gtcacagtcaacatactgttagaggacgggctccacgagcccatctcggacttccgccag
aaaacagcagagcccagcaagagaaacagtaaaatcaccttttatttgatcatctctctg
gcctctgtgtccgttttgtctttgttgacttttctcatcttagtggtgaagtgcgttaga
aacagtaggagcagctcgagttgctgtatcagacgggctgactctgacggatacaagaat
ccaaacagaaacctgcagctccagctcaacactgacggccctattaagtatgtggaggtc
ctgggaggggacatgttgtctcagagccagtccttcaggtcgtgtctctctccagtgtcc
gagttcagtgatttcaccctcgttaagcccagcagcaccacagacttcaaggacatgata
aacgtgcttgatgcatctttaccggacagcgcgtggacgttcgagagccaacaggtgagc
gcagctactttataa

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