KEGG   Salvelinus namaycush (lake trout): 120056715
Entry
120056715         CDS       T07522                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:snh04515]
    120056715
Cell adhesion molecules [BR:snh04515]
 Cadherins
  Protocadherins
   120056715
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th TOC159_MAD
Other DBs
NCBI-GeneID: 120056715
NCBI-ProteinID: XP_038860847
UniProt: A0A8U1ET80
LinkDB
Position
Sna12:39835205..39837782
AA seq 817 aa
MWTLVKIKIFPWLALWMFFLLWNTIEAQTRYTIPEELDAGSVVGNIAKDLGFDIAKISDR
KLRIAPGAGKAYFAVDLGKGELIVNERIDRESLCGQSASCLLPLQVIIEDPLQFYRVEVE
ILDINDNSPRFKSDENTVNVAESTLPGARIPLETAQDPDVGANMLRSYTLNTNDFFKLNV
KNSRDGTKIPELVLENAVDREKQSVHHLILTAFDGGSPARLGIAKFTVIVLDNNDNAPSF
EQDLYEIHLSENTNPGTLVLTVKADDLDEGSNSAIVYSFGSQTPDDVQKRFAIDQETGEI
TLSHELDYEIGPSYKFDVCARDKGTPSMEGHSDVQVTVIDVNDNSPEITITSSPKPVRED
APVGTMVALISAKDLDSGENGQVSLRMSSDYPFKLNPSFADHYALVTHATLDREKYPEYR
IELEASDSGSPALTSNKIITVNILDVNDNPPVFSQPSYTVYVRENNAAGSIMCSVSASDP
DIGENAKISYSILDSKVQDVSVSSYIYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDHGS
PSLSSNVTVHVFILDQNDNAPAVIYPSTVMGSVSHQKMPRSAKAGHLTTKISAVDADSGH
NAWISYRLVEATDSSLFSVNLYTGEVRTKRAVSEQDDSSQRLLIGIQDNGEPVQSATVTV
NILLEDGLHEPISDFRQKTAEPSKRNSKITFYLIISLASVSVLSLLTFLILVVKCVRNSR
SSSSCCIRRADSDGYKNPNRNLQLQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPVSEFS
DFTLVKPSSTTDFKDMINVLDASLPDSAWTFESQQWC
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgtggacgctagtcaagattaagatttttccatggctggcactatggatgttctttctc
ttgtggaatacaatagaggcgcagactcgatacaccattcccgaggaactggacgcgggc
tctgttgttggaaatatagctaaggacttgggctttgacatcgctaagatctctgatcgc
aaactgaggatagcccccggggctggtaaggcatatttcgctgtggatttgggaaagggc
gagctcattgtaaatgaacggatagacagagagagtctgtgcggacaaagcgcgagttgt
ttgttacctctgcaggttatcattgaggatccacttcagttttatcgagttgaggttgaa
atactggatataaatgacaactctccacgtttcaagtcagatgaaaacacagtaaatgtg
gcggaatcaactctaccaggggcaagaattccgttggaaacggcacaggacccggatgtt
ggagcaaatatgctgcgctcttacaccttgaatacaaacgacttcttcaagttgaatgtt
aagaatagcagagacggaacaaagattcctgaacttgttcttgaaaatgccgttgacaga
gagaaacagtcggtccaccatctcattcttacagcatttgatggaggttctcctgctaga
ttgggaatagcgaaatttacagttatcgttttagataacaatgacaacgcaccaagtttt
gagcaagacttgtatgagatccatcttagtgaaaataccaatcctggaacgttagtattg
actgttaaagctgacgatttagatgagggctctaacagtgctatagtttattcattcggg
tcacaaacaccagatgacgtgcaaaaacgttttgctatcgaccaagagacaggagaaata
acattgtcacacgagttagattacgaaattggtccctcttacaaatttgatgtatgtgcg
agagacaaaggcacgccatctatggaggggcacagcgatgttcaggtgacggttatagat
gttaatgataactcacctgagataaccatcacctcctcacccaaacccgttagagaggat
gccccagtagggaccatggtagctctaattagtgcaaaggatttggactcgggagaaaat
ggtcaagtttcccttcgtatgtcttcagattaccctttcaaattaaacccctcatttgca
gatcattacgcactagtaacacatgcaactttagaccgggagaaatatcctgaataccgt
attgagcttgaagcatcggactcagggtccccagctttgacctcgaataaaatcataacg
gttaatattttagatgttaatgacaaccctccagttttctcccaaccttcttacactgtt
tacgtcagagagaacaatgctgctggatcaataatgtgttcagtgtccgcttcagatcca
gatataggagagaatgcgaagatatcctattctatattagactctaaagtacaagacgtg
tctgtctcctcctatatttatataaactcggataacggcagcatctacagtatgcactcg
tttgactatgagaaactgaaggtgtttcagatacaggtccaggcaaaggaccacggctct
ccgtctctgagcagcaacgtcacggttcatgtttttatcctggaccagaacgacaatgca
cccgctgttatttacccttccactgtcatgggctctgtctcccatcagaagatgccccgg
tccgctaaagcaggccacctcaccactaagatatcggcagtggacgcagactcgggtcat
aacgcctggatttcctataggctggtggaggccacagactcgtctctgttcagtgtgaat
ctttacacaggggaggtgaggacaaaacgcgctgtttcagagcaggatgactcctctcag
aggctgcttatagggatacaggacaatggggaaccggtccagtctgccacagtcacagtc
aacatactgttagaggacgggctccacgagcccatctcggacttccgccagaaaacagca
gagcccagcaagagaaacagtaaaatcaccttttatttgatcatctctctggcctctgtg
tccgttttgtctttgttgacttttctcatcttagtggtgaaatgcgttagaaacagcagg
agcagctcgagttgctgtatcagacgggctgactctgacggatacaagaatccaaacaga
aacctgcagctccagctcaacactgacggccctattaagtatgtggaggtcctgggaggg
gacatgttgtctcagagccagtccttcaggtcgtgtctctctccagtgtccgagttcagt
gatttcaccctcgttaagcccagcagcaccactgactttaaggacatgataaacgtgctt
gatgcatcattacctgacagtgcgtggacgttcgagagccagcagtggtgctga

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