KEGG   Salvelinus namaycush (lake trout): 120056716
Entry
120056716         CDS       T07522                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:snh04515]
    120056716
Cell adhesion molecules [BR:snh04515]
 Cadherins
  Protocadherins
   120056716
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th TOC159_MAD
Other DBs
NCBI-GeneID: 120056716
NCBI-ProteinID: XP_038860848
UniProt: A0A8U1EP38
LinkDB
Position
Sna12:39841452..39843917
AA seq 821 aa
MWTLVKIKIFPWLALWMFFLLWNTIEAQTRYTIPEELDVGSVVGNIAKDLGFDIAKISDR
KLRIAPGAGKQYFAVDLGKGELIVNERIDRESLCGQSASCLLPLQVIIEDPLQFYRVEVE
ILDINDNSPLFMSGENTIKVPESTLSGVRFRLETAQDRDVGINYLRSYSLNKNDFFALNV
KNNKDGTKVAELVLEKTVDREQQPVHNLILTAVDGGTPARSGTTHVTVMVIDINDNAPSF
DQDLYEIQLSENAIPGALVLTVRANDLDEGPNSKIEYSFESHTAESIQKLFVINEDTGAI
TLTDALDYEKSPSYKFDVCARDKGTPSMEAHSSVQVTIVDVNDNSPEITITSSPKPVRED
APVGTMVALISAKDLDSGENGQVSLRMSSDYPFKLNPSFADHYALVTHSTLDREKYPEYR
IELEASDSGSPALTSIKIITVNILDVNDNPPVFSQPSYTVYVRENNAAGSIMCSVSASDP
DKGENAKISYSILDSKVQDVSVSSYIYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDHGS
PSLNSNVKVHVFILDQNDNAPAVIYPSTVMGSVSHQKMPRSAKAGHLATKISAVDADSGH
NAWISYRLVEATDSSLFSVNLYTGEVRTKRAVSEQDDSSQRLLIEIQDNGEPVQSATVTV
NILLEDGLHEPISDFRQKTVEPSKRNSKITFYLIISLASVSVLSLLTFLILVVKCVRNSR
SSSSCCIRRADSDGYKNPNRNLQLQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPVSEFS
DFTLVKPSSTTDFQDMINVLDASLPDSAWTFESQQVSAATL
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgtggacgctagtcaagattaagatttttccatggctggcactatggatgttctttctc
ttgtggaatacaatagaggcgcagactcgatacaccattcccgaggaactggacgtgggc
tctgttgttggaaatatagctaaggacttgggctttgacatcgctaagatctctgatcgc
aaactgaggatagcccccggggctggtaagcaatatttcgctgtggatttgggaaagggc
gagctcattgtaaatgaaaggatagacagagagagtctgtgcggacaaagcgcgagttgt
ttgttaccactacaggttatcattgaggatccacttcagttttatcgtgttgaggtggaa
atactggatataaatgacaattctccacttttcatgtcaggcgagaacactataaaagtg
cccgaatcaactctatctggtgttcggtttcgtttggaaacggcacaggaccgtgacgtc
gggataaattatttgcgctcatattctctgaataaaaatgacttctttgctttgaacgtt
aaaaacaataaagacggcacaaaggttgccgagcttgttctggaaaagactgttgaccgg
gaacagcagccggtgcacaacctaattcttactgcggttgatggaggtactccggcaaga
tctggaaccacgcatgttactgtgatggtgatagacataaacgacaatgcgcctagtttt
gaccaagacttgtatgaaatccaactgagtgaaaatgcaatacccggggcattagtattg
acagttagagccaacgacttggatgaaggcccaaacagtaaaatagagtattcattcgaa
tcgcatacagcagagtccattcaaaagctatttgtaatcaatgaagacacaggagctatt
actttaaccgacgcattagattacgaaaaaagtccttcatataaatttgatgtatgcgct
agagacaaaggcacgccatctatggaggcacacagtagtgtccaggtaaccattgtagat
gttaatgataactcacctgagataaccatcacctcctcacccaaacccgttagagaggat
gccccagtaggtaccatggtagctctaattagtgcaaaggatttggactcgggagaaaat
ggtcaagtttcccttcgtatgtcttcagattaccctttcaaattaaacccctcatttgca
gatcattacgcactagtaacacattcaactttagaccgggagaaatatcctgaataccgt
attgagcttgaagcatcggactcagggtccccagctttgacctccattaaaataataaca
gttaatattttagatgttaatgacaaccctccagttttttcccaaccttcttacactgtt
tacgtcagagagaacaatgctgctggatcaataatgtgttcagtgtccgcttcagatcca
gataaaggagagaatgcgaagatatcctattctatattagactctaaagtacaagacgtg
tctgtctcctcctatatttacataaactcggataacggcagcatctacagcatgcactcg
tttgactatgagaaactgaaggtgtttcagatacaggtccaggcaaaggaccacggctct
ccgtctctgaacagcaacgtcaaggttcatgtttttatcctggaccagaacgacaatgct
cccgctgttatttacccttccactgtcatgggctctgtctcccatcagaagatgccccgg
tccgctaaagcaggccacctcgccactaagatatcggcagtggacgcagactcgggtcat
aacgcctggatttcctataggctggtggaggccacagactcgtctctgttcagtgtgaat
ctttacacaggggaggtgaggactaaacgcgctgtttcagagcaggatgactcctctcag
aggctgcttatagagatacaggacaatggggaaccggtccagtccgccacagtcacagtc
aacatactgttagaggacgggctccacgagcccatctcggacttccgccagaaaacagta
gagcccagcaagagaaacagtaaaatcaccttttatttgatcatctctctggcctctgtg
tccgttttgtctttgttgacttttctcatcttagtggtgaagtgcgttagaaacagtagg
agcagctcgagttgctgtatcagacgggctgactctgacggatacaagaatccaaacaga
aacctgcagctccagctcaacactgacggccctattaagtatgtggaggtcctgggaggg
gacatgttgtctcagagccagtccttcaggtcgtgtctctctccagtgtcagagttcagt
gatttcaccctcgtcaagcccagcagcaccactgactttcaggacatgataaacgtgctt
gatgcgtctttaccggacagcgcgtggacgttcgagagccaacaggtgagcgcagctact
ttataa

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