Salvelinus namaycush (lake trout): 120057023
Help
Entry
120057023 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37-like
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120057023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120057023
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120057023
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120057023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HTH_1
zf-C3HC4_2
HlyD_2
MRFAP1
PIN_8
FUSC
Motif
Other DBs
NCBI-GeneID:
120057023
NCBI-ProteinID:
XP_038861308
UniProt:
A0A8U1C2W3
LinkDB
All DBs
Position
Sna12:complement(24260430..24295843)
Genome browser
AA seq
987 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVSKVNEEVAKLRRRLMELISLVQEVERNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPP
LQISGICWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQVSSDPTKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYIS
QLESAQSSYIQQINNLKERLAIELFRRQKSRSSSPPDRRLGPSTSERDSRSGKGPVAEDG
CQTTATETKEEEEEEEKTQHDDSNELSDGDLEVDCLTGDEEVNPLDGSSTSGSSTATSNT
EENDIDEETMSGENDVEFSGNLEMEEGELPDDVAGAAGGSNHGARCLRRGGGLSSAGSNN
SLLEIDPVILIQLLDLKEHNNVESLWGLQPRPPASLLHSQVQVHSRKERGERRPQAVRRG
APDSGVLIRLKAQMAEVRSKMTDVKFQLEARGEARAGPSGGATGEQGPSYHADSDLGSSR
NSTELDLMGKGPGASRHCRSGGKKALSPKQEGSGLGLRRATDRVEEESRGQSGEELSSDQ
SLFPRDTPKGSEGALKPHSVHSSPPSLGSSSSCSDSKPCISKHDQEQLYGADLYALGGLN
GISTSTIARPRTQPMGSGLLTDSSLDCDLEETAEVRQSLLSLAEGPSSRSDESEPYCSNP
PLPSPLPRPSSMEECYCDGSHLVHKQTVVLLPGMSSDSEIDCDTENEDEVVALEAGDCRY
DAQALPCAGAQLNSDDLCFTTGENTER
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaaagtgttgagagtattgcggaggtgttccgctgtttcatctgtatggag
aagctgcgggatgctcggctctgcccccactgctccaaactctgctgcttcagctgcata
cggcgctggttgactgagcagagagcccaatgcccacactgtcgggcaccactgcagctg
cgggagttggtgaactgccgctgggctgaagaggttacccagcagctggacaccctgcag
ctctgcaatctctccaaacatgaggagaacgacaaggacaagtgtgagaaccaccatgag
aaactcagtgtgttctgctggacctgtaagaagtgcatctgccaccagtgtgctctgtgg
ggaggcatgcatggcggccacaccttcaagcctctggctgagatctacgagcagcacgtg
tccaaggtgaacgaggaggtggccaagctccgccgccgcctcatggagctcatcagcctg
gtgcaggaggtggagaggaacgtggaagcagtgcgaggggccaaagacgagcgagtgcga
gagatacgtaatgcagtagagatgatgattgcccgtctcgacaaccagctcaaaaacaaa
ctcatcaccctcatgggtcagaagacctccctcacccaagagactgagctactggagtct
ctcctgcaggaggtggaacatcagctgcgctcctgcagtaagagcgagttgatctccaag
agcccagagatcctgctgatgttccagcaggttcaccgcaagcccatgcagtcctttgtc
accactccagtccccccagacttcaccagtgagctggttcctgcctatgactcaagcact
tttgttctggccaacttcagcaccctgagacagagggcagatcccgtctatagcccccca
ctccagatatctggcatctgctggagactcaaggtttatccagatggcaacggtgtggtg
cgcggcaactatctgtccgttttcttggaactatctgcaggactccctgaaacgtcaaaa
tatgagtaccgtgtggagatggtccatcaggtctccagcgaccccactaagaacatcatt
agggagtttgcatcagactttgaggtgggggagtgctggggctacaatcgcttcttcaga
ctggacctgttggccagcgagggctacctcaacatgcagactgacaccctggtcctcagg
tatcaggtgcgttcgcccaccttcttccagaagtgcagagaccagtactggtacatcagc
cagctggagtcagcccagtccagctacatccagcagatcaacaacctcaaagagaggctg
gccattgagctgttccgtaggcaaaagtctcgcagctcgtccccgcctgaccggcgcctg
ggcccctcgacctcggagagagactctcgctcagggaaaggtcccgtggctgaggatggc
tgccagaccactgccactgagaccaaagaggaagaggaggaggaggagaagacccagcac
gacgactccaatgagctgtctgatggggacttggaagtggactgtctgacaggggacgag
gaggtgaaccctctggacggtagcagcacctcgggcagctccacggcaacgagcaacaca
gaggagaacgacatcgacgaggagaccatgtctggggagaatgatgtggagttcagtggg
aacctggagatggaggagggagaactgcctgacgatgtggcaggggcagcaggaggctct
aaccatggggccaggtgtctgagacgtggtggaggtctctcctccgctggcagcaacaac
agtctgctggagattgacccagtcatcctcatccagctactggacctgaaggaacacaac
aacgtggagtcactatggggccttcagcccagacctcctgcttccctgttgcacagccaa
gtccaagtccactccagaaaggagcggggtgagcgccggcctcaggcagtgaggagggga
gccccagactcaggggtcctgatccggctcaaggcccagatggctgaggtgcgcagtaag
atgacggatgtcaagtttcagctggaggcgcggggggaggccagggcaggaccctctggc
ggagccacaggggaacaggggccctcttaccacgcagactcagacctggggtccagcaga
aattccacagagctggatctgatggggaaaggacctggggcctccagacactgtcgctct
ggagggaagaaggccttgtctcccaagcaggagggcagcgggctgggcctgaggagagct
acagacagagtggaggaggagtcgagaggccagagcggtgaagagttgtctagtgatcaa
agcctcttccccagggacacccccaaaggatcagaaggagctctgaagccacatagcgtg
cacagctcccctccttctctaggcagctcatcgtcctgctccgacagcaagccctgcatt
tccaaacacgaccaggagcagctctacggggctgacctgtacgctctggggggccttaac
ggcatctccacctccaccatagcacgacccaggacccagcccatggggtccggcctgctg
acggacagctctctggactgtgacttggaggagacggctgaggtccgccagtcactgctc
tccctggcagagggaccctcttcacgctctgacgaaagtgagccctactgctctaaccct
cctcttccttcacctctacctcgaccctcctctatggaggaatgctattgtgatggcagt
catcttgtccataagcagacggtggtgctgctgccaggtatgagcagtgacagtgagatc
gactgtgacacggagaacgaagacgaggtggtggccctggaggctggagactgtcgctat
gatgcccaggcactgccctgtgcaggggcccagttgaactctgatgacctgtgcttcacc
acaggagagaacaccgagaggtga
DBGET
integrated database retrieval system
