Salvelinus namaycush (lake trout): 120057088
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Entry
120057088 CDS
T07522
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120057088
Peptidases and inhibitors [BR:
snh01002
]
Metallo peptidases
Family M10
120057088
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_4
Reprolysin_5
Reprolysin_3
DUF4953
Metallopep
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
120057088
NCBI-ProteinID:
XP_038861420
UniProt:
A0A8U1ERA0
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Position
Sna12:31175572..31181860
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AA seq
473 aa
AA seq
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MKTFNLCLLLINLAIVVYSLPISPPSEEDEAFAETYLKRFFNLTEETGPAFKRGPSQRSR
KVSEMQNFFGLQVTGTLDAETVTMMKKPRCGVPDVQLSRFTTFDNRKWQTNQVTYRIENY
TPDMSVAEVDNSIERALQVWAKVSPLRFTRIYSGIADIRISFGTRNHGDSYPFDGPDGTL
AHAFSPGADIGGDAHFDDDESFSFSSTRGYNLFLVAAHEFGHSLGLSHSTDPGALMYPVY
SYTDPSTFSLPRDDVNGIQYIYGPNTDVNPNPDKPDPTPPSTPNACDPTLVLDAVTTLRG
EKMFFKGRFFWRSYSQSSKPQQSLIKNFWPELPDNINAAYESQLSDRVFLFKDSQVWALY
GYDIVPGYPRNLNSLGLPSTVKKVDAALYDVDSHKTLFFVDDNYYSYDEAMKRMDKGFPK
RVDEGFPGMTSKVTAAFQVRGFTYLYSGSYMFEYSMRTRRQLRVLGNNYFLPC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttcaatctgtgcttactactaatcaacctggcaatagtggtttactctttg
ccaatatcgccacctagtgaagaagatgaagcctttgcagagacgtacctgaagaggttt
tttaacctgacagaggagacgggtcctgcattcaaacgggggcccagccagcggagcagg
aaggtcagcgagatgcaaaatttctttggtctccaggtgacaggaaccttggacgctgag
actgtgacgatgatgaagaagccacgctgtggggtacctgatgtccaactcagccgcttc
accaccttcgacaatcgcaagtggcagaccaaccaggttacctacaggattgagaactac
acccctgacatgtctgtggctgaggtggacaactccatagagagagcactacaggtgtgg
gccaaggtctcccccctgaggttcacccgcatctacagcggcatcgctgacatcaggatc
tccttcggcaccagaaatcatggtgattcttaccccttcgatggccctgatggcaccctg
gcccatgccttctcccctggcgctgacattggaggagatgctcattttgacgatgatgag
tccttcagcttcagctcaaccagagggtacaacctgttcttggtggctgcccatgagttt
ggccattcccttggtctcagccactccaccgaccctggagcgctgatgtacccagtgtac
agctacacagaccccagcaccttctctctgccccgcgatgacgtcaacggtatccagtac
atctatggtccaaacacagatgtgaaccccaacccagacaagccagatcctacaccccct
tccacccctaatgcctgtgaccccaccctagttttggatgctgtcaccactctgcgtggg
gagaagatgttcttcaagggcaggttcttctggcgtagctactctcagagcagcaaacca
caacagagcctcatcaagaacttctggcccgaactccccgacaacatcaatgctgcttac
gagagccagctatctgacagagtgttcctcttcaaagatagtcaggtctgggctctctac
ggctatgacatcgtccccggttatcccagaaacctgaacagcttgggtctgcccagtacc
gtgaaaaaagttgacgctgccctgtatgatgtagattctcacaagaccttgttcttcgtt
gatgacaactactacagttacgacgaggcaatgaaaaggatggacaaaggtttccccaag
cgtgttgatgaagggttcccaggcatgacaagcaaagtgactgccgccttccaagtccga
ggctttacctacctctatagtggctcctacatgtttgagtacagcatgaggaccaggaga
cagttacgcgtgctaggaaacaactacttcctgccctgttag
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