Salvelinus namaycush (lake trout): 120057128
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Entry
120057128 CDS
T07522
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04110
Cell cycle
snh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120057128 (rb1)
04218 Cellular senescence
120057128 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120057128 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120057128 (rb1)
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120057128 (rb1)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
120057128 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
RGS-like
YfeC-like
Motif
Other DBs
NCBI-GeneID:
120057128
NCBI-ProteinID:
XP_038861492
UniProt:
A0A8U1ETI8
LinkDB
All DBs
Position
Sna12:33129313..33169758
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AA seq
910 aa
AA seq
DB search
MPPKKRNSGTAQNKEMKPSIKNASPDKENPDLSIEKHQEKDADFMTLCQSLQVTDAVCDR
AWTIWKAVQASVDKVLDTQKRLWAACLFVAVIDLEVASFTFTQILKAVDLNVKQFLGLLK
KMDVNLDTISTKVNSAVTRLEKKYDVSRALYQRFEKTCSKIYAEDSEAKGKEILRSCWTM
FLLAKGRALQMEDDLVISFHLMVCVLEFFIRRCPSSLLQPLYQSVISTAQSPPTRTSRRN
QSKAKPRQAPPEVDVQLLETLCKENDCSVEEVKSVYQTSFSAFLDSMSLSGTRDLPQAID
LNKQYEELYFKSRDFDSRLFLDNDETLLTPKVEPMPVERTPRKNLPEDVVLIPPQTPVRA
AMNSIAQLRVDLTTSGDQPSSNLAVYFKNCTVDPTEEVLQRVESLGLLFSQRFGQAVGPR
CVGLGKQRFTLGIRLYYRVMESMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVVMAT
YGGSTFKNSGYSNGGVPVETDLCFPWILDVFQLTAFDFYKVIESFIKAEPSLSKDIVKHL
ERCEHLIMETIAWRENSPLFELLKRTREEGPVEQAEPPATLNQPLQHNHTAADLYLSPVR
PSSRTLPAPESTAPPSSQPSAPVPHQTPRHPKSNSLSLFYKKLYRLAYMRLKMLYTQLLT
SHPELEPIMWTLFQHTLQNEYELMRDRHLDQLMMSAMYAICKVKNVDLRFKTIVTAYKNM
PNTNQETFKHVLIREGQYDSIIVFYNLVFMQKLKTNILQYASPRPPTLSPIPHIPRSPYK
FPNSPLRVPGSNNVYISPMKSPTRMSPVMTPRTRILVSIGESFGTSDKFQKINAMVNSSD
RSLKRSLDMSSAPKPLKRLRFDVEGQDEADESKHGEDSRLIQKLTEIGSTRTRMQEQKMK
DDAESEKDKP
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaaaaacgcaactctggaacagcacagaacaaggaaatgaagcccagcata
aaaaacgcctccccggacaaggagaatccagatttatcaattgaaaagcaccaagagaag
gatgcagactttatgactctgtgtcaaagtctccaggtgacagatgcggtgtgtgatcgt
gcttggacaatatggaaggcagttcaggcctcagtggacaaagttcttgacactcaaaaa
aggctttgggctgcttgtctgtttgtggctgtgatagacttggaagttgcaagttttacc
tttactcaaatcctgaaggcagtggatctgaatgtgaagcagttcctgggcctgctgaag
aagatggatgtgaacctggacaccatcagcactaaggtgaactcagcagtgacacgactg
gagaagaagtatgacgtgtcacgggcactctaccagaggtttgagaagacatgcagcaaa
atctatgcagaggactcagaagcaaaggggaaagaaatcctgcggagctgctggacaatg
ttccttttggctaagggaagggctctgcagatggaggatgacctggtcatatccttccat
ctgatggtgtgtgttctggagttcttcatcaggcgttgcccgtccagccttctgcaacca
ctttaccaatcagtcatcagcacagcccaaagccccccaacaagaacctcccgtcgcaat
cagagcaaagccaagccccgtcaagccccgccagaggtggatgtgcagctcctggagacc
ctctgcaaagagaacgactgcagcgtggaagaggtgaagagcgtgtaccagaccagtttc
tctgctttcctggattccatgagcctctctgggactcgggaccttcctcaggcgattgac
ctcaacaagcagtatgaggaactctacttcaagagtagagactttgacagtaggctgttc
ttggataatgacgagacccttctcactcccaaagtagaaccaatgccggtggaaaggaca
ccaaggaagaacctgccagaagatgttgttctcatccccccacagacgcctgtcagagct
gccatgaactccatcgcacagttgagggtcgatctcaccacctctggcgaccagccctct
tccaacctggcagtgtatttcaagaactgcacagtggacccaacagaggaggtgttgcag
cgtgtggagagtctgggcctgctgttcagccagaggtttggtcaggctgtgggaccacgc
tgtgtggggctgggcaaacagaggttcacccttggcatccggttgtattacagagtcatg
gagtccatgctgaaatcggaagagaaaaggctgtcggtgcagaatttcagtaaactactc
aatgactccacattccacacctcgctcctggcctgcgctttggaggtcgtcatggcaacc
tatggtgggagcaccttcaagaacagtggttacagcaacggtggcgttcctgtggagacg
gacctgtgcttcccatggatcctggatgtgttccagctgacagcgtttgacttctacaag
gtcatcgaaagcttcatcaaggctgagcccagcctgagcaaagacatcgtcaagcacctg
gagcgctgcgaacacctcatcatggagaccatcgcctggagggagaactcgccactgttt
gagctgctgaaacggacccgtgaggagggtccagtggagcaggcagagccccctgccacc
ctcaaccagcccctacagcacaaccacactgcagctgacctgtatctttcccctgtgcgg
cccagtagccgtaccctgccggcccctgaatctacagccccaccctcctctcagccctct
gccccggtgccccatcagacccctaggcacccaaagtccaactctctcagcctcttctac
aaaaaattgtaccggctggcctacatgaggctgaagatgctgtacacacaacttttgacc
tctcaccctgagctggagccaatcatgtggactctgttccagcacacactgcagaatgag
tatgaactgatgagagaccgccacctggaccagttgatgatgtcggccatgtacgccata
tgcaaggtgaagaacgtggacttgcgtttcaagaccatcgtcactgcttacaagaacatg
cccaacaccaaccaagagacatttaagcacgtgttaatccgggagggccagtatgactcc
atcattgtcttctacaacctggtgttcatgcagaaactgaagaccaacatcctgcagtac
gcctctcccaggccccccacactgtctcccatcccacacatcccccgcagcccctacaag
ttccccaactcccccctgagagtgcctggcagcaacaacgtctatatctctcccatgaag
agcccaacacgcatgtctccagtcatgaccccacgtaccagaatcctggtatcgatcggt
gaatcgtttggaacctctgataagttccagaagatcaatgcgatggtgaacagcagtgat
aggtccttgaagaggagtttggatatgagctctgcccccaagcccctgaagaggttgcgc
tttgatgtagaaggacaggatgaagctgatgagagcaaacatggggaagattcgagactg
atacagaaacttacagagataggctccactcggacccgtatgcaggaacagaagatgaag
gatgatgcagagtccgaaaaggacaagccttga
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