Salvelinus namaycush (lake trout): 120058140
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Entry
120058140 CDS
T07522
Name
(RefSeq) C-X-C chemokine receptor type 1-like
KO
K05050
C-X-C chemokine receptor type 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04060
Cytokine-cytokine receptor interaction
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120058140
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120058140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120058140
04050 Cytokine receptors [BR:
snh04050
]
120058140
04090 CD molecules [BR:
snh04090
]
120058140
G protein-coupled receptors [BR:
snh04030
]
Rhodopsin family
Chemokine
CXC Chemokine
120058140
Cytokine receptors [BR:
snh04050
]
Chemokine receptors
CXC Chemokine
120058140
CD molecules [BR:
snh04090
]
Proteins
120058140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
120058140
NCBI-ProteinID:
XP_038862537
UniProt:
A0A8U1BYW7
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Position
Sna13:41401834..41402931
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AA seq
365 aa
AA seq
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MQLVEMQEMDYNDLLYSDISNITYPPVDELKAAPCSVSILGLSSVGLMVTYIIVFVLSVL
GNSVVIYVMCCMARGRTTTDIYLMHLAMADLLFSLTLPFWAVYVYSHWIFGTFLCKLLSG
LQDAAFYSGVFLLACISVDRYLAIVKTAQALAKRRHLVGKVCGAVWLGAGILSLPAVLQR
EAIQLEDLGDQTICYENLTASSSNQWRVFVRVLCHTLGFFLPLAVMVVCYSCTAATMFRG
MRNGDHKHKAMRVILAVVFAFVICWLPCNVSVLVDTLMRGGSLGEETCEFRNSVSVALYV
TKVIAFTHCAVNPVLYAFIGQKFRNQLLLTLHKHGLISKRVLAAYRRSSAHSTVSQRSRN
TSVSL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgtggaaatgcaagaaatggactataatgatttgctctactccgacatctcc
aacatcacctatcctcccgtagacgagctcaaggcagccccctgtagtgtgtctatcttg
ggcttgagcagtgttggtctgatggtcacatacatcattgtgtttgtcctaagtgtgctg
ggcaacagtgtggtcatctacgtgatgtgctgcatggctaggggccggaccaccacagac
atctacctgatgcaccttgccatggccgacctcctcttctccctgaccctccccttctgg
gccgtctacgtctactctcactggatctttggtaccttcctctgtaagctcctgtctggc
ctccaggatgctgccttttatagtggggtcttcctgttagcgtgcattagcgtggaccgc
tacctggctatcgtgaagaccgcgcaggcgctggctaaacggcgccacctggtggggaaa
gtttgtggagccgtgtggctgggtgcggggattctctcattgcccgcggtgctccagcgg
gaagctatccaactggaggatcttggcgaccagaccatctgctacgagaacctgactgcg
tcgagcagcaaccagtggcgggtgtttgtgcgggtgctttgccacacgctgggcttcttc
ctgccgctggcagtcatggtcgtatgttacagctgcacggcggcgacaatgttccgtggc
atgcgcaacggcgaccacaaacacaaggccatgcgcgtcatcctggccgtggtgtttgcg
ttcgtgatatgttggctgccgtgcaatgtcagcgtgctggtagacacattgatgcggggc
ggctcgctgggcgaggagacgtgtgagttccggaacagtgtgagtgtggcgctgtacgtg
accaaggtgatagcgttcacgcactgtgcagtcaaccccgtgctgtacgccttcatcggg
cagaagttccggaaccagctcctgctgacgctccacaagcatggactgatcagcaagagg
gtgctggccgcttaccgcaggagctcggcccacagcacggtcagtcaaaggtctaggaac
acctccgttagcctgtaa
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