Salvelinus namaycush (lake trout): 120058470
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Entry
120058470 CDS
T07522
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00260
Glycine, serine and threonine metabolism
snh00270
Cysteine and methionine metabolism
snh00670
One carbon pool by folate
snh01100
Metabolic pathways
snh01230
Biosynthesis of amino acids
Module
snh_M00035
Methionine degradation
snh_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120058470
00270 Cysteine and methionine metabolism
120058470
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120058470
Enzymes [BR:
snh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
120058470
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Motif
Pfam:
PALP
CBS
Methyltransf_12
Glyco_tran_WecG
PDH_N
Motif
Other DBs
NCBI-GeneID:
120058470
NCBI-ProteinID:
XP_038863076
UniProt:
A0A8U1BSX6
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Position
Sna13:34529761..34549613
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AA seq
613 aa
AA seq
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MPSVPSSTDSVRPVSSVCPHAAMLHNNATKANGEAAILNGGSKVNGEAMLNDPKFSMNGL
AQVNGEEGENDLENTATGTEERQWIRPDLPSRCTWKLGVSSAESPHCHSAKTEAPRILPN
ILRRIGDTPLVRMNKIPKAFGLKCELLAKCEFFNAGGSVKDRISLRMVEDAERAGILKPG
DTIIEPTSGNTGIGLALASAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTAARFDS
PESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTAEEILEQCDGKVDMLVAGAGTGG
TITGIARKLKERCPNIKIVGVDPEGSILAEPEELNITDKTQYEVEGIGYDFIPTVLDRSV
IDTWCKSNDEESFAMSRMLIREEGLLCGGSSGTAMAAAVKMSTELKEGQRCVVILPDSIR
NYMSKFLSDNWMCDKGFLTPNDLMVSKSWWWNLTLQSLNLCAPITVLPSVNIKKTIKILK
EKAFDQAPVVDESGMILGMVTLGNMLSSVLAGKVKVSDPVSKVLYKQFKQVRLTDNLGKL
SRILETDHFALVVHEQIQFMADGSSCLRQMVFGVVTSIDLLNYITTHERRGSARERTMSE
CSMTSECSLTDEL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccttcggttccctccagcacagactctgtgcgccctgtgtcctccgtctgcccccac
gcagctatgcttcacaacaacgctaccaaggccaacggagaggccgccattttgaatggg
gggtccaaggtcaatggagaagcaatgttgaacgaccccaagttctccatgaatggattg
gcccaagtgaatggggaggagggggagaacgacctggagaacacagccacaggcactgag
gagaggcagtggatccgtcctgatctgcccagtagatgcacctggaaattgggtgtgtcc
tctgccgagtcccctcactgccactctgcaaagaccgaagcccccagaattctacccaac
atcctcaggaggattggagacacacctttggtccgcatgaacaagatacccaaagccttc
ggcctcaagtgtgaactcttggccaagtgtgagttcttcaatgcagggggcagtgtgaag
gaccgtatcagtctgaggatggtggaggatgcagagagagctggcatcctcaaacctgga
gacaccatcatcgagcccacctccggcaacaccggtattggtctggccctggcctctgca
gttaaaggctatcgctgcatcatcgtcatgcctgagaagatgagcatggagaaggtggac
gtgctgagagccttgggggcagagatcgtgcgtacccccaccgccgcccgttttgattcg
ccagagtcccacgtgggcgtagcctggcgtctgaagaacgagattcccaactctcacatc
cttgaccagtatcgtaacgctagcaaccccctggcccactacgacactactgccgaggag
attctggagcagtgcgatggtaaggtggacatgttggtggcaggagctggcacaggtggc
accatcactggcatcgcccgcaagctgaaggagagatgccccaacatcaagatcgtgggc
gtggaccctgagggttctatcctggctgagccagaggagctgaacataacagacaagacc
caatacgaggtggagggcatcggatatgacttcatccccaccgtgctggacagatctgta
attgacacgtggtgtaagtccaatgatgaggagtcctttgccatgtcacgcatgctgatc
agggaggaggggcttctttgcggaggtagttcaggcacggccatggctgcagcagtgaag
atgagtacagagctgaaggagggccaacgctgtgtcgtcatcctgcctgactccatccgc
aactacatgtctaagttcctcagtgacaactggatgtgtgataagggcttcctaacccca
aatgacctgatggtgtccaaatcctggtggtggaacctgactctgcagagtctgaacctg
tgtgcccccatcaccgtgctgccctccgtcaacatcaagaagaccatcaagatcctcaaa
gagaaggcttttgaccaggcacccgtcgttgacgagtccggcatgatcctagggatggtt
accctgggcaacatgttgtcttctgtgctggctgggaaggtcaaggtgtctgaccctgtc
tccaaggtgctctacaaacaattcaaacaggtgcgactgaccgataacctgggaaagctg
tcccgtatcctggagacagatcactttgccttggtggtgcatgagcagatccaattcatg
gcggacggctcctcctgtctgagacagatggtgtttggggtggtgacgtccattgaccta
ctcaactacatcaccacgcatgagaggcggggaagcgcacgggagcgcacgatgtcggag
tgctccatgacatctgagtgctcgctgactgatgagctgtaa
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