Salvelinus namaycush (lake trout): 120059926
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Entry
120059926 CDS
T07522
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04620
Toll-like receptor signaling pathway
snh04621
NOD-like receptor signaling pathway
snh04622
RIG-I-like receptor signaling pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120059926 (traf3)
04621 NOD-like receptor signaling pathway
120059926 (traf3)
04622 RIG-I-like receptor signaling pathway
120059926 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120059926 (traf3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
Sina_ZnF
BLOC1_2
zf-TRAF_2
CALCOCO1
zf-RING_UBOX
DUF1664
Snapin_Pallidin
zf-RING_6
Fez1
DNA_topoisoIV
Spc7
TolA_bind_tri
FapA
Motif
Other DBs
NCBI-GeneID:
120059926
NCBI-ProteinID:
XP_038864930
UniProt:
A0A8U1GYD4
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Position
Sna15:31498546..31512934
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AA seq
573 aa
AA seq
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MSAGRNADGRELQIPLQQCALSLAALSLAQRPWPSDHVAGFLPQHGGFRDHFVATPEPKY
CCESCKLVLCNPRQTECGHRFCETCISEQLSKPNPVCPEDNLSLFKDKVFRDVCCHREIM
ALRVYCRSEKNGCKEQISLQQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSWKCKH
RETTCEFCMQKMAMTELQKHKDTVCPSFPVACPNHCTFPSILRSKLTSHQHECPKAHVTC
SFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKVEDVKGELLERYKVLPGLS
SRLSETLSHYEEMREKNRQLDQKLNTMQELMSSHSEKLLEMELELRSLRSVREEVETLRG
TVESIRSRVATLEGGRGGANPATHTLETQLSRHDDMLSVHEIRLADMDLRFQVLETASFN
GMLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggcggaatgcggacgggcgggagctgcagatccccctccagcaatgcgct
ctctccctggccgctctctccctggcccagcgcccctggcccagcgaccacgtggcaggc
ttcctaccccagcacgggggctttagggaccacttcgtagccaccccggaacccaagtac
tgctgtgagtcctgcaagctggtgctttgcaaccccaggcagacagaatgcggacacagg
ttctgtgaaacctgcatctctgagcagctaagcaaaccgaatccagtatgtccagaagat
aatttgtctctgttcaaagacaaggtcttccgtgacgtatgctgccatagagagattatg
gctctgagagtgtactgcaggagtgaaaagaacggctgtaaggagcagataagtttacag
caggtcatggatcatttaaatgtgtgtccgtattttgaggtgccatgcccgttgggaaag
tgcaaagagaagatgatgcgaaaagacattcctgaacatttgagttggaaatgtaaacac
agggagaccacctgtgaattctgcatgcagaagatggccatgactgagttacagaaacac
aaagacaccgtttgtccttcatttccggtggcctgccccaatcattgtactttcccctcc
atcttacggagcaaactgacaagtcatcaacatgagtgtccaaaggctcatgtcacctgc
tcctttatacgctttggatgtaatttcaagggtctcaaccaagacatgagggaccatgaa
tctagctttgcctctgaacacctgcggttgatggcaaccaggaacactacactggaggcc
aaggtggaggatgttaaaggagagcttctggagcggtacaaggttctgccaggcctgagc
agccgtctgtctgaaacattgtctcactacgaggagatgagggagaagaatagacagctg
gaccagaagctcaataccatgcaggagttgatgagttcccactctgagaagcttctggag
atggagctggagctgaggtctctgaggtctgtccgagaggaggtagagaccctccgagga
accgtggagagcatccgctccagagtcgccactctagaaggaggacggggcggggccaac
ccagccacacacacactagagacacagctctcccgtcacgacgacatgctgagcgtccat
gagatccgcctagcagacatggacctgcgcttccaggtcctagagacggcctccttcaat
gggatgctcatctggaagatccgggactacaagcggcggaaacaagaggccgtggcgtca
aagaccctgtctctctacagccagcctttctacactggctactttggctacaagatgtgt
gcccgggtctacctgaacggtgacggcatggggaaaggaacccacctgtctctgttcttc
gtggtgatgcgtggcgagtacgacgccctgctgccctggccctttaagcagaaggtgacc
ttgatgctgatggatcagggcccagccagaaagcacttaggggatgcctttaaaccagac
cccaatagcagcagcttcagacggcccacggcagagatgaacatagcctcgggctgcccg
ctgtttgtggctcagactgtgctggagaacggtacttacatcaaggacgataccatcttc
attaaggtcacagtagatacgtctgacctccctgacccctga
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