Salvelinus namaycush (lake trout): 120060053
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Entry
120060053 CDS
T07522
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120060053 (bcl11ba)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120060053 (bcl11ba)
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Paralog
GFIT
Motif
Pfam:
zf-C2H2
CCHC_BCL-11A
zf-H2C2_2
zf-C2H2_16
zf-C2H2_4
zf-C2H2_15
zf-H2C2_5
DUF7565
zf-C2H2_ATbp_2nd
DUF3268
Motif
Other DBs
NCBI-GeneID:
120060053
NCBI-ProteinID:
XP_038865045
UniProt:
A0A8U1EW11
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All DBs
Position
15:33730686..33773514
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AA seq
810 aa
AA seq
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MPAEADHVDGGLSVSDSLTQPHPHPQPHPHPHPHLQPHPHPHPLLSHPALLDPSLSDSLA
MGLGDHDLLTCGQCQMNFPLGDILLFIEHKKKQCQALLQGPGCYDKMAADRSSPSPPHQQ
QQNQGRHGHSQLRKVVEPVEIGIQVTPEEEEDERLMVTPIKGICPKQESALAGRDEPSSY
ICTTCKQHFPSAWFLLQHAQNTHGIRIYLESNPSSASLTPRITIPGPPMGQDSIPQSPLT
NFLGESNPFHLLRMTGPMLREPPPGFMENRGGLPNTPPFVSPPPRHHLDPHRLERLSAEE
MGLISQHPSAFERVMRLTPMAIESQSMDFSRRLRQLAGNNNVATPPLSPSRANPMHRLLN
PNPFQPSPKSPFLSTPPLPPMPPNSTTPPQTQAKSKSCEFCGKTFKFQSNLVVHRRSHTG
EKPYKCQLCDHACSQASKLKRHMKTHMHKSGSMTGRSDDGLSTTSSPEPGTSDVTGEGMK
NRDGDFRGEGEEEEEEEEEEEPENESRPVSNFSMDNMEFYRNRENGSKPPSDEKNALSLG
KMVESVGLSTIQQYNNLIVDNRKNRMLFSKRGSDGQRDTGDEDSVVGEMEREHHHHQMER
DHQKPTVNGRNCGSGDSFSGLFPRKPTPITSPCLSNSSNKRIKIEKDLEMPSAPLIPSEN
VYSQWLVGYAASRHFIKDPFLGFTHSRQSPFGTSSEHSSENGSLRFSTPPGDLLDGGLSG
RSGTASGGSTPHLGGPGPGRPSSKESRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKC
ELCNYACAQSSKLTRHMKTHGQMGLPVMCS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggaggctgaccatgtggatggcggactttccgtgtctgactccctcacccaa
cctcacccccaccctcaacctcacccccaccctcaccctcaccttcaacctcacccccac
ccccaccccctgttgtcccacccggccctgctggaccccagcctatccgacagcctggcc
atggggctgggggaccacgacctgctcacctgcggccagtgtcaaatgaacttccccctg
ggagacatcctgctcttcatcgagcacaagaagaagcagtgccaggccctactgcaaggc
cctggctgctacgacaagatggccgccgaccgcagcagcccctccccgcctcaccagcag
cagcagaaccagggtcgccacggtcacagccagctgaggaaagtggtggaaccggtggaa
atcggaatccaggtgacaccggaggaggaagaggatgagaggctgatggtgacgcccatc
aaaggaatttgccccaagcaggagagtgccctggcaggaagggatgagccttctagctac
atctgcaccacgtgtaagcagcacttccccagcgcctggttccttctacagcacgcccag
aacacccacggcatccgcatctacctggaatccaacccctccagcgcatcgctcaccccc
cgcatcaccatccccgggccccccatgggccaggactccatcccccagtctcccctcacc
aatttcctgggagagagcaaccccttccacctgctgaggatgaccgggcccatgctccga
gagcccccaccaggcttcatggagaaccgcggaggcctccccaacacacctcccttcgtc
agccccccaccccgccaccacctggacccccaccggctggaacgccttagtgccgaagaa
atggggctcatctcccagcaccccagtgccttcgagagggtgatgcggctaacgccgatg
gccatcgaatcccagtccatggacttctccaggcggctccggcagctggcagggaacaac
aacgtggccacccctcctctgtcgcccagccgggccaaccctatgcaccgcctgctcaac
cccaaccccttccagcccagcccaaagtcgccctttctcagcaccccgcccctgccgccc
atgccccccaacagcaccaccccgccccagacgcaggccaagagcaagtcatgcgagttc
tgtgggaagaccttcaagttccagagtaacctggtggtccaccggcggagccacaccggg
gagaagccctataagtgtcagctgtgtgaccatgcctgctcccaggccagcaagctgaag
agacacatgaaaacacacatgcataagtctggttccatgacaggacggtctgacgacggg
ctctccaccaccagctcaccggagccgggcaccagcgacgtgacaggagagggcatgaag
aaccgagatggagacttcaggggtgagggcgaagaggaggaagaggaggaggaggaagag
gagccggagaatgagagcaggccggtgtcaaacttcagcatggacaacatggagttctac
cgtaaccgtgagaacggctccaagccgccatcagacgagaagaatgccctctctctcggc
aagatggtggagagtgtgggcctgagcactatacagcagtacaataacttgatagtcgac
aatcgtaaaaatcggatgctcttctccaagagggggtccgacgggcagcgggacactggg
gatgaggactctgtggtgggagagatggagagggagcaccatcaccaccagatggaaagg
gaccaccagaagcccacggtcaatggcaggaactgtggctccggcgactctttctcaggc
ctgttcccccgcaaacccactcccatcaccagcccctgcttgtccaactcctccaacaag
aggatcaagattgagaaggacctggaaatgccctcggcgcccctcatcccctccgagaac
gtctactcccagtggctggtgggatacgctgcctcacgacacttcatcaaagaccctttc
ctgggctttacccactccagacaatctcccttcggcacctcctctgagcactcgtctgag
aacggcagcctgcgcttctccacgccccccggggacctcctggatggcggcctgtcgggg
cgcagcggcacagccagcgggggcagcacccctcacctggggggcccgggacctggccgg
cccagctccaaggagagcagacggagcgacacctgcgagtactgcggcaaggtgttcaag
aattgcagcaacctgacagtgcaccggcgcagccacacgggagagaggccctacaagtgc
gagctgtgcaactacgcctgcgcccagagctccaagctcacccgccacatgaagacccac
gggcagatggggctccctgtgatgtgtagttga
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