Salvelinus namaycush (lake trout): 120060229 Help Entry 120060229         CDS       T07522                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism snh  Salvelinus namaycush (lake trout) Pathway snh04115   p53 signaling pathway snh04145   Phagosome snh04148   Efferocytosis snh04350   TGF-beta signaling pathway snh04510   Focal adhesion snh04512   ECM-receptor interaction snh04518   Integrin signaling snh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:snh00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     120060229   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120060229    04518 Integrin signaling     120060229  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     120060229    04148 Efferocytosis     120060229   09143 Cell growth and death    04115 p53 signaling pathway     120060229   09144 Cellular community - eukaryotes    04510 Focal adhesion     120060229   09142 Cell motility    04820 Cytoskeleton in muscle cells     120060229  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:snh04131]     120060229   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:snh00536]     120060229 Membrane trafficking [BR:snh04131]  Endocytosis   Phagocytosis    Opsonins     120060229 Glycosaminoglycan binding proteins [BR:snh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120060229 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_ADAMTS EGF_3 TSP1_CFP_C cEGF TSP1_CCN EGF Motif Other DBs NCBI-GeneID:  120060229 NCBI-ProteinID:  XP_038865316 UniProt:  A0A8U1EWF5 LinkDB All DBs Position 15:complement(16513269..16522772) Genome browser AA seq 1172 aa AA seqDB search MKLTGVFLLLVLWNCEGSRVAESGDDNGVYDLFELVKVNKRHQGVTLVKGADPYSPAYKV LNADLIPPVPEISFRDLIDSVQAERGFLLLVNFKQYKKTRGSILTVEKKDGSGPIFEIIS NGKAQTLDVVYSTRNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEIDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAIMRNKGCQSSATLTDV MTLDNPVNGSSPAIRTDYTGHKSKEIQQVCGFSCEDITSMFKELKGLGVVVKQLSNELNR VNKESTLLMNQMNIHSGVCLHNGIVHKDKDEWTVDGCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFRQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQKSPCPIDGVWGPWSLWDTCSVTCGGGFQTHQRLCNNPTPKYGGKECQGDGKTS QLCGKEDCPIDGCLSNPCFAGAKCTSFDDGSWKCGACPVGYTGDGINCKDIDECKEVRDA CFTLNGVHRCENTEPGYNCLACPPRYSGQQPFGRGVEQATAKKQVCTPRNPCQDGSHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDNDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDRDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL ENNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKSGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGMYVFSQEMTYFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacaggagtatttctccttttggtgctttggaattgtgagggcagccgggtg gcagagagtggagatgataacggtgtatacgacctattcgagcttgtgaaagtgaacaag aggcaccaaggagttaccttggtaaaaggcgcagatccctacagcccagcctataaggtc ttgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattca gtacaagctgaaagaggattccttctcctcgtcaacttcaagcagtacaagaaaaccagg ggtagtattttgactgtggagaagaaagacggatcaggaccgatattcgaaattatttct aatggcaaggcgcaaactctggatgtggtatactctaccaggaacaagcaacaggtagtg tccatagaagatgcagatctagcgacaggacattggaagaatatcacgctgttcattcag gaagatcgtgcccagctgttcgtaggatgtgaagagatcaatatatccgaaatagacgtg cccatccaaaaggtcctgacgcatgaggttgcggacattgcccgtctgagaattggaaaa ggagctgtgaaagacagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc actttggaggcaatcatgcgcaataagggatgccaaagctctgcaacattgactgatgtc atgaccctggacaacccagtcaatggatctagcccagcaataaggactgattacactggc cacaaaagcaaagaaattcagcaggtctgtggcttttcctgtgaggatatcaccagtatg ttcaaggagctcaagggactcggcgtggttgttaagcagctgtcaaacgagctcaacaga gtgaataaggagagcactctgctcatgaaccagatgaacatccacagtggggtctgtctt cacaacggcatcgtgcacaaggacaaagatgagtggaccgtggacggctgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgtcccctgatgccctgtgcc aacgccaccgtgcccgatggagagtgctgcccacgttgtggaaccccgagtgactatgct gaggatggctggtccccctggtccgaatggactcattgttctgtgtcttgtggacgggga atccagcagcgaggtcgatcatgcgaccgcatcaacagcaattgcgagggcacctctgtg cagacccgcgactgctaccctcaggaatgtgacaagcgcttcaggcaggatggtggctgg agccactggtctccctggtcctcctgctctgtgacctgtggtgaaggagtcatcacccgc attcgcctttgcaactccccaactccccagatgggaggcagagactgccaaggacagggc agagagaccgaggtctgccagaaatcaccttgtccaattgacggagtctggggaccctgg tctttatgggacacctgctctgtcacctgtggaggtggattccagactcaccagcgtctt tgtaacaaccccacccccaaatacggaggaaaggaatgtcagggtgacggcaaaacatcc cagctgtgtggaaaagaggactgccctattgatggctgtctgtccaacccctgctttgct ggcgctaagtgtaccagctttgatgatggttcctggaagtgtggcgcatgcccagtgggc tacaccggagacggcatcaactgcaaggacatcgatgagtgcaaggaggtccgtgacgca tgcttcacactcaacggagtccaccgctgtgagaacactgagcctggttacaactgcctt gcctgcccccctcgctactcaggacaacagcccttcgggagaggagtggagcaggccaca gccaagaaacaggtgtgcacaccccgtaacccctgccaagacggcagccatgattgcaac aagaatgccaactgtatctacctgggtcagttcagcgacactatgttccgctgtgagtgc aaacctggttacgctggcaatggccacatctgtggagatgacactgacctggatggatgg cccaacaaagacctcctgtgtgtggagaacgccacctaccactgcaagaaggacaactgt ccaaaccttcccaactctggacaggaggatcacgacaatgatgggcttggtgacgcttgc gatcatgatgatgacaacgatgggatccctgatgatagggacaactgcccaatggtctac aaccccgctcagtatgatgtggacagagatgacgttggtgatcgatgtgataactgtgtg catgagagcaaccccgaccaagtcgacacagacaacaacggagagggggatgcctgtgct attgacattgacggtgatggcattctaaatgagagggacaactgcccatacgtctacaat gtggaccagagagacactgacggggatggagtgggagaccactgtgacaattgccctctt gaaaacaacccagaccagattgactctgactcagaccgtgtgggagacaagtgcgacaac aaccaggacattgatgaggacggtcatcagaacaacttggacaactgtccctatatcccc aacgccaaccaggccgaccacgacaaagacggcaagggtgacgcctgtgaccacgatgat gacaacgacggtatccctgacgacaaggacaactgtaggctggcctttaaccctgaccag ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagacaac attcttgatatctacgatgtgtgccctgagaactttgccatcagtgagacggacttccgc aggttccagatggtaccgctagaccccaagggaacctcccagatcgaccccaactgggtg gtccgtcaccagggcaaagaactggtgcagaccgtcaactgtgaccctggcatcgctgtt gggttcgatgagttcaacgcagtggacttcagtggaacgttctttatcaacacagacagg gacgatgactatgctggatttgtgtttgggtaccagtccagctccaggttctacgtggta atgtggaagcagatcacacagacttactggtcccacacgccgaccagagctcagggctac tccggagtgtccatcaaagtggtcaactccaccacaggacctggggagcatctgaggaat gccctctggcacaccggtgacacagctggacaggtgcgtactctgtggcacgaccccaag aacatcggctggaaagactacaccgcctacagatggcacctgatccacaggcccaagtct ggactcatcagagttgtgatgtatgaagggaagagaatcatggccgattccggaaatatc tacgacaagacttatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatatgaatgcagagattcttaa

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