Salvelinus namaycush (lake trout): 120060229 Help Entry 120060229         CDS       T07522                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism snh  Salvelinus namaycush (lake trout) Pathway snh04115   p53 signaling pathway snh04145   Phagosome snh04148   Efferocytosis snh04350   TGF-beta signaling pathway snh04510   Focal adhesion snh04512   ECM-receptor interaction snh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:snh00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     120060229   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120060229  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     120060229    04148 Efferocytosis     120060229   09143 Cell growth and death    04115 p53 signaling pathway     120060229   09144 Cellular community - eukaryotes    04510 Focal adhesion     120060229   09142 Cell motility    04820 Cytoskeleton in muscle cells     120060229  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:snh04131]     120060229   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:snh00536]     120060229 Membrane trafficking [BR:snh04131]  Endocytosis   Phagocytosis    Opsonins     120060229 Glycosaminoglycan binding proteins [BR:snh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120060229 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS EGF_3 TSP1_CFP_C cEGF TSP1_CCN EGF Motif Other DBs NCBI-GeneID:  120060229 NCBI-ProteinID:  XP_038865316 UniProt:  A0A8U1EWF5 LinkDB All DBs Position Sna15:complement(16513269..16522772) Genome browser AA seq 1172 aa AA seqDB search MKLTGVFLLLVLWNCEGSRVAESGDDNGVYDLFELVKVNKRHQGVTLVKGADPYSPAYKV LNADLIPPVPEISFRDLIDSVQAERGFLLLVNFKQYKKTRGSILTVEKKDGSGPIFEIIS NGKAQTLDVVYSTRNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEIDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAIMRNKGCQSSATLTDV MTLDNPVNGSSPAIRTDYTGHKSKEIQQVCGFSCEDITSMFKELKGLGVVVKQLSNELNR VNKESTLLMNQMNIHSGVCLHNGIVHKDKDEWTVDGCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFRQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQKSPCPIDGVWGPWSLWDTCSVTCGGGFQTHQRLCNNPTPKYGGKECQGDGKTS QLCGKEDCPIDGCLSNPCFAGAKCTSFDDGSWKCGACPVGYTGDGINCKDIDECKEVRDA CFTLNGVHRCENTEPGYNCLACPPRYSGQQPFGRGVEQATAKKQVCTPRNPCQDGSHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDNDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDRDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL ENNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKSGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGMYVFSQEMTYFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacaggagtatttctccttttggtgctttggaattgtgagggcagccgggtg gcagagagtggagatgataacggtgtatacgacctattcgagcttgtgaaagtgaacaag aggcaccaaggagttaccttggtaaaaggcgcagatccctacagcccagcctataaggtc ttgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattca gtacaagctgaaagaggattccttctcctcgtcaacttcaagcagtacaagaaaaccagg ggtagtattttgactgtggagaagaaagacggatcaggaccgatattcgaaattatttct aatggcaaggcgcaaactctggatgtggtatactctaccaggaacaagcaacaggtagtg tccatagaagatgcagatctagcgacaggacattggaagaatatcacgctgttcattcag gaagatcgtgcccagctgttcgtaggatgtgaagagatcaatatatccgaaatagacgtg cccatccaaaaggtcctgacgcatgaggttgcggacattgcccgtctgagaattggaaaa ggagctgtgaaagacagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc actttggaggcaatcatgcgcaataagggatgccaaagctctgcaacattgactgatgtc atgaccctggacaacccagtcaatggatctagcccagcaataaggactgattacactggc cacaaaagcaaagaaattcagcaggtctgtggcttttcctgtgaggatatcaccagtatg ttcaaggagctcaagggactcggcgtggttgttaagcagctgtcaaacgagctcaacaga gtgaataaggagagcactctgctcatgaaccagatgaacatccacagtggggtctgtctt cacaacggcatcgtgcacaaggacaaagatgagtggaccgtggacggctgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgtcccctgatgccctgtgcc aacgccaccgtgcccgatggagagtgctgcccacgttgtggaaccccgagtgactatgct gaggatggctggtccccctggtccgaatggactcattgttctgtgtcttgtggacgggga atccagcagcgaggtcgatcatgcgaccgcatcaacagcaattgcgagggcacctctgtg cagacccgcgactgctaccctcaggaatgtgacaagcgcttcaggcaggatggtggctgg agccactggtctccctggtcctcctgctctgtgacctgtggtgaaggagtcatcacccgc attcgcctttgcaactccccaactccccagatgggaggcagagactgccaaggacagggc agagagaccgaggtctgccagaaatcaccttgtccaattgacggagtctggggaccctgg tctttatgggacacctgctctgtcacctgtggaggtggattccagactcaccagcgtctt tgtaacaaccccacccccaaatacggaggaaaggaatgtcagggtgacggcaaaacatcc cagctgtgtggaaaagaggactgccctattgatggctgtctgtccaacccctgctttgct ggcgctaagtgtaccagctttgatgatggttcctggaagtgtggcgcatgcccagtgggc tacaccggagacggcatcaactgcaaggacatcgatgagtgcaaggaggtccgtgacgca tgcttcacactcaacggagtccaccgctgtgagaacactgagcctggttacaactgcctt gcctgcccccctcgctactcaggacaacagcccttcgggagaggagtggagcaggccaca gccaagaaacaggtgtgcacaccccgtaacccctgccaagacggcagccatgattgcaac aagaatgccaactgtatctacctgggtcagttcagcgacactatgttccgctgtgagtgc aaacctggttacgctggcaatggccacatctgtggagatgacactgacctggatggatgg cccaacaaagacctcctgtgtgtggagaacgccacctaccactgcaagaaggacaactgt ccaaaccttcccaactctggacaggaggatcacgacaatgatgggcttggtgacgcttgc gatcatgatgatgacaacgatgggatccctgatgatagggacaactgcccaatggtctac aaccccgctcagtatgatgtggacagagatgacgttggtgatcgatgtgataactgtgtg catgagagcaaccccgaccaagtcgacacagacaacaacggagagggggatgcctgtgct attgacattgacggtgatggcattctaaatgagagggacaactgcccatacgtctacaat gtggaccagagagacactgacggggatggagtgggagaccactgtgacaattgccctctt gaaaacaacccagaccagattgactctgactcagaccgtgtgggagacaagtgcgacaac aaccaggacattgatgaggacggtcatcagaacaacttggacaactgtccctatatcccc aacgccaaccaggccgaccacgacaaagacggcaagggtgacgcctgtgaccacgatgat gacaacgacggtatccctgacgacaaggacaactgtaggctggcctttaaccctgaccag ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagacaac attcttgatatctacgatgtgtgccctgagaactttgccatcagtgagacggacttccgc aggttccagatggtaccgctagaccccaagggaacctcccagatcgaccccaactgggtg gtccgtcaccagggcaaagaactggtgcagaccgtcaactgtgaccctggcatcgctgtt gggttcgatgagttcaacgcagtggacttcagtggaacgttctttatcaacacagacagg gacgatgactatgctggatttgtgtttgggtaccagtccagctccaggttctacgtggta atgtggaagcagatcacacagacttactggtcccacacgccgaccagagctcagggctac tccggagtgtccatcaaagtggtcaactccaccacaggacctggggagcatctgaggaat gccctctggcacaccggtgacacagctggacaggtgcgtactctgtggcacgaccccaag aacatcggctggaaagactacaccgcctacagatggcacctgatccacaggcccaagtct ggactcatcagagttgtgatgtatgaagggaagagaatcatggccgattccggaaatatc tacgacaagacttatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatatgaatgcagagattcttaa

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