Salvelinus namaycush (lake trout): 120060901
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Entry
120060901 CDS
T07522
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04140
Autophagy - animal
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120060901
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120060901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120060901
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120060901
Membrane trafficking [BR:
snh04131
]
SNARE
SNARE associated proteins
Others
120060901
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
120060901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
120060901
NCBI-ProteinID:
XP_038866253
UniProt:
A0A8U1EYB4
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All DBs
Position
Sna16:2513314..2537074
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AA seq
1066 aa
AA seq
DB search
MLATQTPDTGPEAEDVKQWIKEKLAWSLKALQKRYVMTDAVVTSEDGDANLLCSSLEAVF
IHGIKSKYVRSKAGGHGRKGGSRGPLPQPVFWSLLKTVTHGDVITELEKLSFVGTDVGRC
RAWLRLALNHGLMECYLASLFREDSNLQAHYQPSALLLDPEEREVLLSYLQGLASLVFNL
SYKSAVLNEWTTTPLALAGLCPTTQADAVDLPSLTKHKDSWDTVSLSSGGSDTVEVQHGG
TRVIGGVSGGRTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKEPWPCDLEISA
RLENDVNAKRPLKDVLADFRESTNSSQDSMHEDSYVSTPGADHLSENTAFSGSDGETQGP
FTPLTGSSNPASVGSDQEEPSTKTHVPSEVYSHTEVPSSHSDCVESTATTPHLPVTETPQ
EKKTEDSAKSTSAPSAHTNLCRTTSVQSRRVSTDSITHSHSWISEDDIYKPHLEELVGPD
ESLLGFGPALVNGLTSPPPEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGAVGMW
RDYYCELSPFEFRLYLNAEERTCCDNCSLLRCEDARVASAEGRFDLAFPGKRLHLRAANH
DEAEDWVDRIAEAVSKFRPLHRLDDHSEVLQSTDSFVILEEPRKSSPSSPSVPTSPERGG
TAVEQEQQPPLELDWTRPTVPESDAIKEAVLYLSQDAEARNWTPLVFSLSLETLNSFRVQ
DGRKVLCCSHPIEGIRDVVPDVSLGGPAFFRVVTARDTLKLRAKSPEEARAWRGIIRGVL
DSYLENGENGEPNSPGLATGAWGNVHRLVQHRLKGDGVLLAHLYTVPTEKGLDLQGFKCA
GCPKPVGVSRGKARLCEFSGKYYCDACHQGDTIAIPSRMVHNWDLTPREVSRQALELLAQ
VEHEPLLNLHLLNPNLWEHVEAMAQAHSLRQRLQLVGHYLLTCRSGPCKDIQTRLGLRTY
LLESSHLYSVMDLQQIAEGTYVAYLNMLIRFASNHVQQCDLCTQRGYICQICHAGDIIFP
FQFDTTARCKECKAMFHATCKAQSSSCPRCMRLQRYLESDLQDCSV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagaccccagatacggggccagaggcggaagacgtcaagcagtggatc
aaagagaagttggcgtggtcactcaaggctctgcagaagcgctacgtgatgaccgatgcc
gtggtaaccagcgaggatggcgacgccaacctgctgtgctcttctctggaggccgtcttt
atccacggcatcaagagcaaatatgtccgctccaaggccggaggacatggcaggaaaggg
gggtcccggggacccctcccccagcctgtgttctggagccttctcaagacggtcactcac
ggtgacgtgatcacggagctggagaagctgagctttgtgggtacggacgtgggtcgctgc
cgggcctggctgcggctggccctcaaccacggcctgatggagtgctacttggcctcccta
ttccgtgaggactccaacctgcaggcccactaccagccctccgccctgctcctggaccct
gaggagcgtgaggtgctgctcagttatctccagggcctggcctccctggtcttcaacctt
tcgtacaagtcagccgtgctcaacgagtggaccaccaccccactggctctggccggcctc
tgccccaccacccaggccgacgctgtcgaccttcccagtctcaccaaacacaaggattct
tgggatacggtgtcactgtcgtccggcgggtcggatacggtcgaagtgcagcatgggggg
acgagggtgattgggggggtttcagggggtaggacccctctaaattcttctaatttgagc
ctggacaccacagggtcatctcagctctcctccagcctaagctcagacagtctgctgcag
ggtcatgaccccaagagcccagacaaggagccctggccatgtgacctggagatctctgcc
agactagagaacgatgtcaatgccaagaggcctcttaaagatgttctggcagacttcagg
gagagtaccaactccagtcaggattccatgcacgaggattcgtacgtttccactccgggt
gcagaccacctctcagagaatacggccttcagcggttctgacggcgagacccaggggcca
ttcacacccctcactggctcctctaaccctgcttcagtggggtcagaccaggaggagccg
tccactaagacccatgtcccttccgaagtgtactcgcacactgaagtgccctccagtcac
agtgactgtgtggagagtacagcgacaactcctcacctacctgtcacagagacgccacag
gagaaaaagacagaagattctgctaagagcacctctgcgccttcagcccacacaaaccta
tgccgtactaccagtgtgcaaagcaggagggtgtctacagactcaatcacacattcccac
tcctggatctctgaggatgacatctataagccacaccttgaggaactggttggccccgat
gagtctttactaggctttggcccagctcttgtgaatggattgacctctccccctccagag
cccgagacgccccagtctccccccagcgtggttcaccgcaggcagataggcctgtccaac
cctttccgtgggctgctgaagctgggccatctggagcggcggggcgctgtgggcatgtgg
cgggactactactgcgagctctcgcccttcgagttccgcctctacctgaacgcagaggag
cgcacctgctgtgacaactgctccctgctgcgttgcgaagacgcccgcgtcgcctcggcc
gagggccgcttcgacctggccttcccagggaagaggctccacctgcgggcagccaaccat
gacgaggcagaggactgggtggaccgcatcgcagaggccgtcagcaagttccgcccgttg
caccgccttgacgaccattcagaggtgctgcagtccactgacagctttgtcatcctggaa
gagccccgaaaatcttccccttcgtccccctccgtacccaccagtcccgagcgagggggt
actgcggttgagcaggagcagcagccgccacttgagctagactggacgcgtcccacagtc
cctgagtcagacgccattaaggaggcggtgctgtacctatcccaggacgcagaggctcgc
aactggactcctctggtcttctccctctccttggagactctcaacagtttccgggtacag
gatgggcgaaaggtactgtgctgctcccaccccatcgaggggatacgggacgtggtccca
gacgtttctctggggggaccggctttctttagggtcgtaacagccagagatacgctcaag
ctgagggccaagagccctgaggaggcgcgtgcctggaggggcatcatcaggggagtcctg
gactcctacctggagaatggagagaacggggagcctaatagccccgggttagccactggg
gcatggggcaacgtccacagactggtgcagcatagactgaagggggacggggtgctgctg
gcccatctatatacagtgcccacagagaaggggctggaccttcagggcttcaagtgtgca
ggttgtccaaagccggtgggtgtttcccggggaaaagccagactgtgcgagttctcaggg
aagtactattgcgacgcttgtcaccagggtgacaccatcgccataccctcccgcatggtg
cataactgggacctcacgcctcgcgaggtctccagacaggccctcgaactgctggctcag
gttgaacatgagcccctgctcaaccttcaccttttgaaccctaacctgtgggagcatgtt
gaggccatggcccaggcacacagtctcagacagaggctgcagcttgtaggacactacctg
ctcacctgccgcagtgggccatgcaaggatattcagaccagactgggcctaaggacatac
ctgttagaatcaagccatctctacagtgtcatggacttacaacagatagcggagggaaca
tatgttgcctacttgaatatgttgatccggtttgcctccaaccacgttcaacaatgtgac
ctttgcacccagaggggctacatctgccagatctgtcatgccggtgacatcatcttcccc
ttccagttcgacaccactgccaggtgtaaagagtgtaaggcaatgtttcacgcaacttgc
aaggcccagtcgtcctcgtgtccacgatgcatgcgtcttcagaggtacctcgagagcgat
ctgcaggactgctctgtttga
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