Salvelinus namaycush (lake trout): 120061205
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Entry
120061205 CDS
T07522
Name
(RefSeq) vitamin D3 receptor A-like
KO
K08539
vitamin D3 receptor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120061205
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120061205
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120061205
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120061205
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120061205
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
120061205
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
120061205
NCBI-ProteinID:
XP_038866758
UniProt:
A0A8U1EZC0
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Position
Sna16:23545641..23627538
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AA seq
436 aa
AA seq
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MDPQTPPSLSRSVMEPMAVSTSVVGPDEFNRNMPRICGVCGDKATGFHFNAMTCEGCKGF
FRRSMKRKASFTCPFNGSCSITKDNRRHCQACRLKRCVDMGMMKEFILTDEEVQRKKDLI
QKRKEEEAVREALRPRLNDEQSQVIASLVEAHHKTYDDSYSDFSHFRPPVREGPVTRSAS
RAASFHSLSDASSDSFNHSPESVDTKLMKFSSLLIMYQDSAGSPDSSEDDGSKFSMLPHL
ADLVSYSIQKVIGFAKMIPGFRGLTAEDQIALLKSSAIEIIMLRSNQSFNLEDMSWSCGG
SPDFKYCINDVTKAGHTLDLLEPLVKFQVGLKKLSLHEEEHVLLMAICLLSPDRPGVQDH
AKIEVLQDSLSEVLQAYIRVNHPGGRLLYARMIQKLADLRSLNEEHSKQYRSLSFQPEHS
MQLTPLVLEVFGSEVS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatccacagacccctccctctctgagtcgctcagtgatggagcccatggcagtgagc
acctcagtggtcgggccggatgagttcaaccgcaacatgccgcgcatctgcggcgtctgt
ggcgacaaggccaccggcttccacttcaacgccatgacctgcgagggctgcaagggcttc
ttcagacgcagcatgaagcgtaaggccagtttcacctgccctttcaacggcagctgctcc
atcaccaaggacaaccggcgccactgccaggcctgccggctcaaacgctgcgtggacatg
ggcatgatgaaggagttcatcctgacagatgaggaggtgcagaggaagaaggatctgatc
cagaagaggaaggaggaggaggcggtgcgggaggccctgagaccaaggctgaatgacgag
cagagccaggtcatcgcatcattggtggaggcacaccacaagacctacgacgactcctac
tccgacttctcacacttcaggcccccggtgcgagagggcccagtaacacgcagtgccagt
cgtgcagcctcctttcactcgctgtcagatgcctcctcagactccttcaaccactcacca
gagtcggtggacaccaagctgatgaaattcagcagtctattgattatgtaccaggacagt
gcaggcagcccggactccagtgaggacgatggctccaagttctccatgttaccccacctg
gctgacctggtcagttacagcatccagaaggtcatcggcttcgctaagatgatccctggc
ttcagagggctgactgctgaggaccagatcgccctgctcaagtcaagtgccatcgagatc
attatgttacgctccaaccagtctttcaacctagaggatatgtcctggagctgtggtggt
agccctgacttcaagtactgcatcaacgacgtcaccaaggcgggtcacactctggacctg
ttggagccgctagtgaagttccaggtgggcctgaagaaactcagccttcatgaggaggaa
cacgtgctgctcatggccatctgcctgctttctccagatcgtccaggggtgcaggaccac
gctaagatcgaggttctccaggacagtctgtcggaggtgctccaggcctacatcagggtg
aaccacccgggaggacggctgctctatgccaggatgatccagaagctggccgacctgcgc
agcctcaacgaggagcactccaaacagtaccgctcgctgtccttccagcccgagcacagc
atgcagctcaccccgctggtgctggaggtgtttggaagcgaggtgtcctag
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