Salvelinus namaycush (lake trout): 120061253
Help
Entry
120061253 CDS
T07522
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1-like
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00600
Sphingolipid metabolism
snh00604
Glycosphingolipid biosynthesis - ganglio series
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120061253
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
120061253
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120061253
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
120061253
Glycosyltransferases [BR:
snh01003
]
Glycan extension
Glycolipid
120061253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Motif
Other DBs
NCBI-GeneID:
120061253
NCBI-ProteinID:
XP_038866860
UniProt:
A0A8U1EZI0
LinkDB
All DBs
Position
Sna2:29920239..29943277
Genome browser
AA seq
532 aa
AA seq
DB search
MRSLRKTVLLAIVASVVLVVALLHSWPTRAYTTVDVRQRPGPIVERHLEERLPEPDQRSA
NIPYRLKESVAGLLARNGCVCEGESGGVNLPFAQLLFPRVSAHPLHTAFDASELEEMKRR
RAKEFQGFQMRSQTPVDMLIVAEANNPLQYPTQGVEVRPLKTILIPGLALQDLPRELYTV
NFTSTLGALNVAAEVEGVKVKGDGEMHMTLMSSLLPNLNRQLQFVSYTNTLFHPSTADTV
QFETEGHQAMFTIKIRHRVTPKLYNTGPKGEYNISALVTIATKTFLRYDKLQDLIDSVRR
YYPTVTIVIADDSENPKTVSGPYIEHYIMPFGKGWFAGRNLAVSQVTTKYLLWVDDDFIF
TANTKLEKLVDVLEKTTLDLVGGAVREATGYTATYRQTISIEPGEEEEGDCLHMRRAFHH
IIQGFPNCVVTDGVINFFLARTDKVQQVGFDPRLARVAHLEFFIDGLGSLHVGSCDDVIV
NHATKIKLPWVSQSESDKTYAKFRYPPASSDATHTKNGLLYFKNHFQCLTHN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccctgaggaagacagtgttgttggccattgtggcatcagtggtgttggtggtg
gccctcctccattcttggcccacccgagcctacaccacagtggatgtccgccagagacca
gggcctatagtagagaggcacctggaggagaggctcccagaaccggaccaaagatctgcc
aacatcccctatcgcctgaaggagagtgttgcaggtctgttggcacgtaacgggtgcgtg
tgtgagggtgagagtggtggggtgaacctgccctttgcccagctactgttcccacgggtg
tcggcacaccccctgcacactgcttttgatgcctctgagctggaggagatgaaaagacgg
agggccaaggagttccagggcttccagatgaggtctcagactcctgtagatatgctcatt
gtggccgaggccaacaatcctctgcagtacccaacacagggggtggaagtacggccgctc
aaaaccatactcatcccaggacttgccttacaagaccttcccagagagctgtacacagtc
aacttcacctccaccctgggagcgttaaatgtggcagcggaggttgagggggtaaaggtc
aaaggtgacggggagatgcacatgaccctgatgagcagcctgctgcccaacctgaaccgg
cagttacagtttgtctcctacaccaacacactattccaccctagtacagcagacacagtg
cagtttgagaccgagggacaccaagccatgttcaccatcaagatccgccatcgtgtaact
ccaaaactctacaacacaggacccaaaggggaatacaacatcagtgcccttgttacgata
gcaaccaaaactttcctgcgctatgacaagctccaagatctcatcgacagcgtgcgacga
tactatcccactgtcaccatagtaatagctgatgacagtgaaaaccccaagactgtctct
ggcccctacatcgaacattacatcatgccatttggaaagggctggtttgcaggacggaac
ctagctgtttcccaggtgaccactaaatatctgctgtgggtggatgatgacttcatcttc
acggccaacaccaagctggagaaactagtggacgtactggagaagaccaccctggatctg
gtgggtggtgcagtgcgggaggctacaggctacactgccacctacaggcagaccatctcc
attgagccaggggaggaggaggagggcgactgcctgcacatgcggagggccttccaccac
atcatacagggcttcccaaactgtgtggtcactgacggggtcatcaacttcttcttggcc
cgcacagacaaggtccagcaggtgggcttcgacccccgcctggccagagtggcccacctg
gagtttttcatcgatggccttggctcgcttcacgtgggatcctgtgatgatgtcatcgtc
aatcacgccaccaagatcaagcttccctgggtcagccaatcagagagtgacaagacttac
gccaagttccgctacccaccagcctcctcggacgccacacacaccaaaaacggcctcctc
tattttaagaaccacttccagtgtttgactcacaattaa
DBGET
integrated database retrieval system
