KEGG   Salvelinus namaycush (lake trout): 120061346
Entry
120061346         CDS       T07522                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:snh03037]
    120061346 (ift122)
Cilium and associated proteins [BR:snh03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   120061346 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122_C Zn_ribbon_IFT122 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_CAF1B_HIR1 TPR_IFT80_172 TPR_GEMI5 Beta-prop_RIG_2nd TPR_IF140-IFT172 Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st eIF2A TPR_7 TPR_COPA_B Beta-prop_WDR75_1st Beta-prop_NWD2_C Beta-prop_IFT140_2nd Beta-prop_SPT8 TTC7_N TPR_12
Other DBs
NCBI-GeneID: 120061346
NCBI-ProteinID: XP_038867020
UniProt: A0A8U1EZN3
LinkDB
Position
Sna16:34405091..34440361
AA seq 1278 aa
MRAVPTWIDKVHDRDKVEQCIYDLAFKPDGSQLIVAAGNRVLVYDTSDGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVSHQLASCSSG
DFGLWSPEQKSVSKHKVNSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGG
SSSPIWSIAWNPSKDWWKWMPFCEGEDNEAVDVDSSMPEPLCLLIDTAYSQSCSGRVEVL
GLGRQLERERQIGRGAETDRSEGEEGEPMLQGVFSDPDHFSQLRDEHNDILAVADWGQKL
SFYQLSGKQIGKDRTLTYDPCCVSYFSKGEYIVMGGSDKQASLYTKDGVRLGTIGEQSSW
VWTCRVKPDSNYVVLGCQDGTIAFFQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKV
RIKCRELVKKIAIYRNRLAIQLPEKILIYELYSDDSSDMHYRIKEKICRKFECNLLVVCS
QHIILCQEKRLQCLSFTSIKEKEWLMESLIRYIKVIGGPPGREGLLVGLKNGAILKIFVD
NPFAITLLKQSTSVRCLDMSTSRSKLAVVDEHNTCLVYDIHTKELLFQEPNANSVAWNTQ
CEDMLCFSGSGYLNIKASNFPVHQQKLQGFVVGYNGSKIFCLHVYSMSAVEVPQSAPMYQ
YLERRMFKEAYQIACLGVTDSDWRDLATEALEGLDFDTAKKAFIRVRDLRYLELINSIEE
RKKRGESDTELFLADVYAYQGKFHEAARLYKRTGLDSRALSMYTDLRMFEYAKEFVGAAD
PKNTRMLMSKQADWAKNSKEPRAAAQMYLTAGEHLKAIDIIGEHGWVDMLIDIARKLDKA
EREPLAKCAAYFQKLKHHGYASETYSKMGDLQALVHLHVEARHWDEAFSLVEKHAQFKDD
VYVPYAQWLAENDRFEEAQKAFHKAGRQSEAVKVLEQLTHNAVVESRFNDAAYYYWMLSM
QCLDIARENEERKEEMLKKFKRFQHLAELYHVYHSIQRYTDEPFSSHMPETLFNISRYLL
HNLTKDVPLGISKVNTLYALAKQSRTLGAFKLARHAYEKLQDLHVPSRFQESMDLGSLTV
RSKPYHDNEDLIPMCYRCSTNNPLLNSQGSVCINCKQPFIYSASSYEVLPLVQFYLDKGI
GDEEAVSLIDLEVPCIDRKAARWQEMSSGESQSLKLDDGTEDTEEDPFMAKLSFEQGGCD
FVPVVVSRSVLRSMSRRDVLIKRWPKPLQWEYYRSLLPDVSITMCPSCFQMFHSEDYELL
VLQHNCCPYCRRPIDEPN
NT seq 3837 nt   +upstreamnt  +downstreamnt
atgagggcagttcctacgtggattgacaaagtacatgatcgcgacaaagttgagcaatgt
atctacgaccttgccttcaaaccagatggcagccagcttattgtggcagctgggaatcgt
gttttggtgtatgacacatcagatggaactctcattcagcctctgaaaggacacaaggac
accgtgtactgtgtcgcctacgccaaagatgggaaacggtttgcctcaggttctgctgac
aaaagcatcatcatctggacatctaaactggagggtattttgaaatatacacataatgac
tccatccagtgtgttgcctacaacccagtcagccaccagctggcctcctgctcctctggg
gactttggtctgtggtccccagaacagaaatctgtatccaagcacaaagtcaacagcaag
ataacatgttgtgggtggaccaatgacggtcagtacctggccctgggaatgatgaacggg
gtggtgagcatcaggaataagaacggagaggagaaggtgaaaatagagcgaccaggagga
tcctcctctcctatctggtccatcgcatggaacccctccaaggactggtggaagtggatg
cccttctgtgagggagaggacaacgaggcggtggatgtggacagcagcatgccagagccc
ctgtgcctgctcattgacaccgcctacagccagagctgcagtggcagggtagaggtcctg
gggctaggcaggcagctggagagagagaggcagataggaagaggagcagagacggacagg
tctgaaggagaggagggggagcccatgctgcagggagtgttctctgatccagaccacttc
agccagctcagggatgagcacaatgacatcctggctgtggcagactgggggcagaagctg
tccttctatcagctcagtggaaaacagattgggaaggacagaactctgacctatgacccc
tgctgtgtcagctacttctccaagggggaatacattgtgatgggtggctcggacaagcag
gcctccctctacaccaaagatggggtgcggctcggcaccatcggggagcagagctcctgg
gtgtggacctgtagagtcaaacctgactccaactatgtggtgttgggctgccaggatggg
accatagccttcttccagctcatcttcagcacggtgcacggcctgtacaaggaccgctat
gcctacagagacagcatgactgatgtcatcgtccagcacctcatcactgaacagaaagtg
aggatcaagtgcagagagcttgtgaagaagatagctatctacaggaaccgcctggccatc
cagctgcctgagaagatcctcatctacgagctgtactctgacgactcctcggacatgcac
taccgcatcaaggagaagatctgcagaaagtttgagtgcaacctgctcgtggtctgctcc
cagcacatcatcctgtgtcaggagaagaggctgcagtgtctgtccttcaccagtatcaag
gagaaggagtggcttatggagtctctgattcgctacatcaaagtgattggtggcccaccg
ggcagagagggcctactggtggggctgaagaatggagctatcctaaagatctttgttgac
aacccatttgccatcactctgctgaagcagtctacgtctgtgcgttgtctggacatgagt
acatcccgcagcaagctggccgtggtggacgaacacaacacctgcctggtttacgacatc
cacaccaaggagctgctcttccaggagcccaatgctaacagcgtagcctggaacacccag
tgtgaggacatgctgtgtttctcaggcagcggctacctcaacatcaaggccagtaacttc
ccagtgcatcagcagaagctgcagggcttcgtggtgggctacaacggctccaagatcttc
tgcctgcacgtgtactccatgtccgccgtggaggtgcctcagtcggctcccatgtaccag
tatctggagaggaggatgttcaaggaggcctatcagatcgcctgcctgggtgtgactgac
agtgactggagggatctggccacggaagcactggaggggctcgactttgacaccgctaag
aaggcattcatcagagtacgagacctgcgctacctggagctcatcaacagcattgaggag
aggaagaagagaggtgagagcgacactgagctgttccttgcggatgtctatgcctaccag
gggaaattccacgaggctgccaggctctacaagaggactggcttggactccagagctctc
agcatgtacacggacctgcgcatgtttgagtacgctaaggagtttgtgggcgcggcagac
cctaaaaacactcgcatgctgatgtccaagcaggccgactgggctaagaacagcaaggag
ccgcgggccgctgctcagatgtacctgactgcaggagaacacctcaaagccatcgacatc
ataggagaacacggctgggtcgacatgctgattgacatagcccgtaagctggataaggcg
gagcgcgaaccactggctaagtgtgcggcctacttccagaagctgaagcaccatggttat
gcctctgagacctactccaagatgggagacctgcaggccctggtgcatctgcacgtggag
gcacgacactgggacgaggccttctctctggtggagaaacatgctcagtttaaagatgac
gtctatgtgccctacgctcagtggctggctgagaacgaccgctttgaggaggcacagaaa
gcgttccacaaggcgggccgacagagtgaggctgtgaaggtgttggaacagcttacccac
aatgccgtggtggagagcaggttcaatgacgcagcatattattactggatgctctctatg
cagtgtctggacatcgctagggaaaacgaagagaggaaggaggagatgctgaagaagttc
aagcgtttccagcacctggctgagctctaccatgtttaccactcaatacagcgttacaca
gatgaaccctttagctcccatatgcctgagacgctctttaacatctccaggtacctccta
cacaacctcaccaaggacgtgccactgggcatctctaaagttaacactctttatgcgttg
gccaagcagagcagaaccctgggagcgtttaaactagccagacatgcctatgagaagctc
caggacctccacgttccctctcgcttccaggagtcaatggacctgggcagccttaccgtc
cgctccaaaccataccacgacaatgaggacctgatccccatgtgttaccgctgttccacc
aacaaccccctgctgaacagccagggcagtgtgtgtatcaactgcaaacagcccttcatc
tattcagcatcttcatacgaggtccttcctctggtgcagttctacctggacaaaggtatc
ggtgatgaggaggctgtgtctctcattgacctggaggtcccttgcattgacaggaaggct
gctcgctggcaggagatgagcagtggggagtcccagtctctgaagctggatgatggcaca
gaagacacagaggaggaccctttcatggccaaactcagctttgagcaggggggctgtgac
tttgtcccggtggtggtgagtcgctccgtgctgaggtctatgagcaggagggatgtcctg
atcaagcgctggcccaaacccctgcagtgggagtactaccgctccttactgcctgatgtc
agcatcaccatgtgcccctcctgcttccagatgttccacagtgaagactatgagctgctt
gtgcttcagcacaactgctgtccctactgccgtcggcccatcgatgaacccaactga

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