Salvelinus namaycush (lake trout): 120062108
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Entry
120062108 CDS
T07522
Name
(RefSeq) CD40 ligand-like
KO
K04389
tumor necrosis factor ligand superfamily member 6
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04060
Cytokine-cytokine receptor interaction
snh04068
FoxO signaling pathway
snh04210
Apoptosis
snh04217
Necroptosis
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120062108
04068 FoxO signaling pathway
120062108
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120062108
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120062108
04217 Necroptosis
120062108
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120062108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120062108
04052 Cytokines and neuropeptides [BR:
snh04052
]
120062108
04090 CD molecules [BR:
snh04090
]
120062108
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120062108
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Tumor necrosis fators
120062108
CD molecules [BR:
snh04090
]
Proteins
120062108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
120062108
NCBI-ProteinID:
XP_038867847
UniProt:
A0A8U1F1E7
LinkDB
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Position
Sna17:14235239..14239517
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AA seq
264 aa
AA seq
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MINMYQTNLPPPPIPPRLGSVKSAPGPGHNKPLLGFLIGMIVLQMLLLLGGFTYLYHKEN
KYDEDFEHKYLDDMIVLRRLGECEKDSQSMLDCEKLVEKYKNIMEKVSEVEGKAVKLTGG
LLSNGAMARMIVKQPVVGALPSSKYLEWNIGHSVLRNVQYFKSSWLKVQQSGDYDIYSQV
AFSKWHPKTPLASRVKLRKGETGEEKNLMTAYCSLGDQNRTDVCTAFQGGVFSLEPEDQI
SVWVTDPSLVNYEEGTTTFGLYKL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacatgtaccagaccaacctgcctccaccaccgatccccccccggctaggctct
gtcaagtcagcaccaggcccgggccacaacaaacctctcctcgggttcctcattggtatg
atagtgctccaaatgctgctactactggggggattcacctacctgtaccacaaggaaaac
aagtatgacgaggactttgaacacaagtacctggatgacatgattgtcctgaggagactt
ggggagtgtgagaaagacagccagtcaatgctggactgtgagaagcttgtggagaaatac
aaaaacataatggaaaaggtctcagaagtggaaggaaaagctgtcaaactcactgggggt
ttgctctcgaatggagccatggcacgcatgatagtcaagcaacctgtggttggtgcactc
ccttcatcaaagtatctggagtggaacataggccactcagtgctgaggaacgtccagtac
ttcaagtccagctggctgaaggttcagcagtctggagactacgacatttactcccaggtg
gccttctccaaatggcaccccaaaacccctctggccagccgggtgaagctgaggaagggg
gagacaggagaggagaagaacctgatgacagcctactgcagcctgggggaccagaatcgt
acagacgtgtgtacggccttccagggaggagtgtttagtctggagcctgaagaccagatc
tctgtgtgggtgacggaccccagcctggtcaactatgaggaggggacgaccacctttgga
ttatataaactgtag
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