Salvelinus namaycush (lake trout): 120062254
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Entry
120062254 CDS
T07522
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04137
Mitophagy - animal
snh04140
Autophagy - animal
snh04217
Necroptosis
snh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120062254 (sqstm1)
04137 Mitophagy - animal
120062254 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
120062254 (sqstm1)
04218 Cellular senescence
120062254 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120062254 (sqstm1)
03029 Mitochondrial biogenesis [BR:
snh03029
]
120062254 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120062254 (sqstm1)
Membrane trafficking [BR:
snh04131
]
Autophagy
Mitophagy
Cargo receptors
120062254 (sqstm1)
Pexophagy
120062254 (sqstm1)
Aggrephagy
120062254 (sqstm1)
Xenophagy
120062254 (sqstm1)
ER-phagy
ER-phagy recepters
120062254 (sqstm1)
Other autophagy associated proteins
Midbophagy
120062254 (sqstm1)
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
120062254 (sqstm1)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120062254 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
120062254
NCBI-ProteinID:
XP_038868009
UniProt:
A0A8U1F1U8
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All DBs
Position
Sna17:complement(7781587..7785660)
Genome browser
AA seq
466 aa
AA seq
DB search
MSMTVKAYLLGKEHISKEIRRFAVDQDVSTSFEYLNRKVVDVFSTLRNVPYQMFYKDEDG
DMIAFSTDDELIMGLTCIKDDTFRLFIKEKKEHRREFPAFAFPGGVPPFAFPPHPGAPHM
GPPPPHGPPPHGHGPHGPPMVHPNVTCDECEGPVAGTRFKCTVCSNYDLCSPCQAKGLHK
EHVLLPIWYPFNNTFECFPRGKWMRKMRHCMWAQAQSQAQSQAQPGTSGSQPGQAAPEDS
QPSSDSSSASSQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVEHEGKRTKVMTPNPTPP
GSGGHPGARSDNGTGGSEGAGANEGDMEVDELSSLGSASGLAKGGKDAGGSGDEEWTHVT
SKEVDPSTGELQSLRVGDEGSLEALGSLTTSQGPSQEPLKSLTLAEAAAYPHLPQDADPR
LVESLSQMLSMGFTDEGGWLTRLLHTKDCDVGAALDTIHYSKPPQK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaccgtgaaagcctatctccttgggaaggaacacatatcgaaagaaattcgt
cgctttgctgtcgaccaagatgtttcaacgagttttgagtatttgaatcgaaaggttgtt
gatgttttctcaacactgcgaaatgtcccctaccaaatgttttacaaagacgaggacggt
gacatgatcgccttctccaccgacgatgagctcatcatgggcctcacctgcatcaaggac
gacaccttccgcctcttcatcaaggagaagaaggagcacaggcgtgagttccctgctttt
gccttcccgggcggtgtccctccttttgccttcccccctcaccctggagcaccccatatg
ggaccccctccaccccatggcccaccacctcatggtcatgggcctcacgggccccccatg
gtgcaccccaacgtgacctgtgatgaatgtgagggcccggtggcggggacccgtttcaag
tgcactgtgtgctccaactacgacctatgttccccgtgtcaggccaaggggctccacaag
gagcacgtcctcctacccatctggtaccccttcaacaacacatttgagtgtttccctcgt
gggaagtggatgcggaagatgagacactgcatgtgggctcaggcccaaagccaggcccaa
agccaggcccagcctggtacctctgggtcccagccaggccaggcggcccccgaggacagt
cagccatcctctgattcctcatctgcttcctcacagcagtcccaggccaatatggattac
ctgaagaacattggagaaggggtggcagccatgcttagcccactgggtatcgatgtggat
attgacgtggagcacgaggggaagaggaccaaggtgatgacccccaacccgaccccacct
gggtcaggaggccaccccggtgctaggagtgacaacgggacaggggggtctgagggagca
ggggcgaacgagggagacatggaggtggacgagctgagcagcctggggagcgccagtggt
ttggctaagggtggtaaagacgccgggggcagcggtgacgaggaatggactcacgtgacc
tccaaggaggtggacccctctacaggagagctccagtctctcagggtgggtgatgagggc
tcactggaagccctagggtccctcaccacttcccagggtccctcacaggaaccactgaag
tccctcactctcgctgaggccgcagcctacccccacttgcctcaagatgcagacccacgc
ctggtggagtcgctgtcccagatgctgtccatgggcttcacagacgagggtggctggctc
acccgtcttctccacaccaaggactgcgatgttggggccgccctggacaccatccactac
tccaaacccccccagaagtaa
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integrated database retrieval system