KEGG   Salvelinus namaycush (lake trout): 120062254
Entry
120062254         CDS       T07522                                 
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
  KO
K14381  sequestosome 1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04137  Mitophagy - animal
snh04140  Autophagy - animal
snh04217  Necroptosis
snh04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:snh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120062254 (sqstm1)
   04137 Mitophagy - animal
    120062254 (sqstm1)
  09143 Cell growth and death
   04217 Necroptosis
    120062254 (sqstm1)
   04218 Cellular senescence
    120062254 (sqstm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:snh04131]
    120062254 (sqstm1)
   03029 Mitochondrial biogenesis [BR:snh03029]
    120062254 (sqstm1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:snh04147]
    120062254 (sqstm1)
Membrane trafficking [BR:snh04131]
 Autophagy
  Mitophagy
   Cargo receptors
    120062254 (sqstm1)
  Pexophagy
    120062254 (sqstm1)
  Aggrephagy
    120062254 (sqstm1)
  Xenophagy
    120062254 (sqstm1)
  ER-phagy
   ER-phagy recepters
    120062254 (sqstm1)
  Other autophagy associated proteins
   Midbophagy
    120062254 (sqstm1)
Mitochondrial biogenesis [BR:snh03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    120062254 (sqstm1)
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120062254 (sqstm1)
SSDB
Motif
Pfam: UBA_5 ZZ PB1
Other DBs
NCBI-GeneID: 120062254
NCBI-ProteinID: XP_038868009
UniProt: A0A8U1F1U8
LinkDB
Position
Sna17:complement(7781587..7785660)
AA seq 466 aa
MSMTVKAYLLGKEHISKEIRRFAVDQDVSTSFEYLNRKVVDVFSTLRNVPYQMFYKDEDG
DMIAFSTDDELIMGLTCIKDDTFRLFIKEKKEHRREFPAFAFPGGVPPFAFPPHPGAPHM
GPPPPHGPPPHGHGPHGPPMVHPNVTCDECEGPVAGTRFKCTVCSNYDLCSPCQAKGLHK
EHVLLPIWYPFNNTFECFPRGKWMRKMRHCMWAQAQSQAQSQAQPGTSGSQPGQAAPEDS
QPSSDSSSASSQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVEHEGKRTKVMTPNPTPP
GSGGHPGARSDNGTGGSEGAGANEGDMEVDELSSLGSASGLAKGGKDAGGSGDEEWTHVT
SKEVDPSTGELQSLRVGDEGSLEALGSLTTSQGPSQEPLKSLTLAEAAAYPHLPQDADPR
LVESLSQMLSMGFTDEGGWLTRLLHTKDCDVGAALDTIHYSKPPQK
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtctatgaccgtgaaagcctatctccttgggaaggaacacatatcgaaagaaattcgt
cgctttgctgtcgaccaagatgtttcaacgagttttgagtatttgaatcgaaaggttgtt
gatgttttctcaacactgcgaaatgtcccctaccaaatgttttacaaagacgaggacggt
gacatgatcgccttctccaccgacgatgagctcatcatgggcctcacctgcatcaaggac
gacaccttccgcctcttcatcaaggagaagaaggagcacaggcgtgagttccctgctttt
gccttcccgggcggtgtccctccttttgccttcccccctcaccctggagcaccccatatg
ggaccccctccaccccatggcccaccacctcatggtcatgggcctcacgggccccccatg
gtgcaccccaacgtgacctgtgatgaatgtgagggcccggtggcggggacccgtttcaag
tgcactgtgtgctccaactacgacctatgttccccgtgtcaggccaaggggctccacaag
gagcacgtcctcctacccatctggtaccccttcaacaacacatttgagtgtttccctcgt
gggaagtggatgcggaagatgagacactgcatgtgggctcaggcccaaagccaggcccaa
agccaggcccagcctggtacctctgggtcccagccaggccaggcggcccccgaggacagt
cagccatcctctgattcctcatctgcttcctcacagcagtcccaggccaatatggattac
ctgaagaacattggagaaggggtggcagccatgcttagcccactgggtatcgatgtggat
attgacgtggagcacgaggggaagaggaccaaggtgatgacccccaacccgaccccacct
gggtcaggaggccaccccggtgctaggagtgacaacgggacaggggggtctgagggagca
ggggcgaacgagggagacatggaggtggacgagctgagcagcctggggagcgccagtggt
ttggctaagggtggtaaagacgccgggggcagcggtgacgaggaatggactcacgtgacc
tccaaggaggtggacccctctacaggagagctccagtctctcagggtgggtgatgagggc
tcactggaagccctagggtccctcaccacttcccagggtccctcacaggaaccactgaag
tccctcactctcgctgaggccgcagcctacccccacttgcctcaagatgcagacccacgc
ctggtggagtcgctgtcccagatgctgtccatgggcttcacagacgagggtggctggctc
acccgtcttctccacaccaaggactgcgatgttggggccgccctggacaccatccactac
tccaaacccccccagaagtaa

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