Salvelinus namaycush (lake trout): 120062593
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Entry
120062593 CDS
T07522
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120062593
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Protocadherins
120062593
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
PepSY
Motif
Other DBs
NCBI-GeneID:
120062593
NCBI-ProteinID:
XP_038868613
UniProt:
A0A8U1F2J6
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Position
Sna17:complement(12403109..12405592)
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AA seq
827 aa
AA seq
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MTKRMGYRDWRWLALWWHHFFLLWSTIDGQTRYTIPEELKQGSVVGNLAKDLGLGLSEIF
DRKLRVASEAGKQYFSVDAGKGELIVNERIDRDTLCGQSASCVLPLQVVIENPLQLYRVE
VEIQDMNDNSPSFPSKQHTLEIAESTAAGVRFPLESAQDPDVGSNSLKSYTLSKDECFTL
KLKEITGGRKVPELVLAKPLDREKKVVHQLLLTALDGGNPIRSGTAQITITVLDNNDNIP
VFEKTVYKVYVSESSAKGTLILQPKATDIDEGQNGEVEYSFGVHTPDSVLSVFEIDPVTG
KLFLKGELDFESAANFEIDISAKDKGTPKMEGHCSVQVEVVDVNDNSPEIVLTSKPSPVR
EDAPSGTVVALISARDLDSGNNGNVTLQLPRDYPFKLKPSFSNNYALVTSGVLDRESFSE
YNIEITATDSGSPPLTTKKTIPVSIIDDNDNSPKFTQSFYDVYLKENGLPGSMLSSVSAS
DLDFGDNAKISYSILDSKVQGVSVSSYVYMNSDNGSIYSMHSFDYETLKVFQILVQAKDH
GSPSLSSNTTVHVFILDQNDNAPAVIYPSTALGSLSHQKMPRSSKAGHLVTKVTAVDADS
GHNAWISYKLAEATDASLFSVNTYTGEVRTKRAVSEQDDSSQRLLIEIKDDGEPVQSSTV
TVAILVEDGLQEPILNLRQKAPEPGKKSGRITLYLILSLASVSMLSLVTFLVLAVKCVRN
SRSSGSCCMRLDDLDGYNNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPMSE
FSDFTFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVSSKQQHCDE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagactggagatggctggctctttggtggcatcatttc
tttctcttgtggagtacaatagacggacagactcgctacaccatcccggaagaactgaaa
cagggctctgtggtaggaaatctagccaaagatctggggttgggactatctgaaattttt
gaccgtaaactgcgtgtcgcttctgaggctggtaagcagtatttcagtgtggatgcgggg
aagggcgagctgatcgtcaacgagagaatagacagagacactttatgcggacaaagcgcc
agctgcgttctacctctgcaggttgtcattgagaacccgttacaactatatcgtgttgag
gtagaaatacaagatatgaatgacaactcccctagttttccttcaaaacaacatacatta
gagatagctgaatctactgcagctggtgtgcgttttccattagaaagcgcacaagaccca
gatgttggaagtaattctctaaaatcatatactcttagtaaagacgaatgtttcacttta
aaattaaaagaaatcactggtggaagaaaagtgccagaactggttttggctaaacctctg
gacagggagaaaaaagttgtccatcagctattattgacagcgcttgatgggggcaatccc
ataagatccggaacggcacaaataacaattacagtgcttgataataatgacaatattccc
gtttttgaaaaaactgtgtataaagtttatgtaagtgaaagtagcgcgaagggtacttta
atactacaacctaaagcgacagacatcgacgagggccaaaatggggaggtagagtattcg
ttcggtgtgcatacacctgattccgtgctgtctgtatttgagattgatcctgtgaccggg
aaattatttttaaagggggaattagatttcgagagtgctgcaaattttgaaattgacatc
agcgcaaaagacaaaggcacccctaaaatggagggacattgtagtgtgcaggtagaagtc
gtagacgttaatgacaactctcctgaaatcgtcctcacctctaaaccgagccctgtgcgc
gaagacgcacccagtggcacagtagtggctttgatcagtgcccgagacctagactccggg
aataacggtaacgtaacgttacagctcccgcgagactatccttttaaactgaaaccgtca
ttttctaacaattacgcactggtcaccagtggtgttttagaccgagagagcttctcagag
tataacattgagataacagccactgattcgggctcccctcccctgactaccaagaaaact
atacctgtcagtatcattgatgacaacgacaactcccctaaattcactcagtccttctat
gatgtctatttaaaagagaatggactaccaggctccatgctctcctcagtctccgcatct
gacctggatttcggggataatgccaagatctcctactccatcctagactccaaagtgcag
ggcgtgtctgtctcctcctatgtgtatatgaactctgataacggcagcatctacagcatg
cactcgtttgactatgagacactgaaggtgtttcagattctagtgcaggcaaaggaccac
ggctctccgtctctgagcagcaacaccactgtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctccactgccctgggctcgctctctcaccagaagatg
ccccgctcttctaaagcaggccacctggttactaaggtaactgccgtagacgcagactcg
ggtcataacgcctggatctcgtataaactggcggaggccacagacgcgtctctgttcagt
gtcaacacttacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgactcc
tctcagaggctgcttatagagataaaggacgacggggaaccggtacagtcttccacggtc
acagtggccatactggtagaggacgggctccaagagcccatcttgaacctccggcagaaa
gcgccagagcccggcaagaaaagcgggagaatcaccctgtatttgatcctctctctggcc
tcggtgtccatgctgtctctggtgactttcctcgtcttagcggtcaagtgcgttagaaac
agcaggagcagcggtagttgctgcatgagactggacgatttggatggctacaataacccc
aatagaaacctgcagatccagctcaacactgacgggcctattaagtacgtagaggtcctg
ggaggggacatgttgtctcagagtcagtccttcaggtcctgtctctctcccatgtcagag
ttcagtgatttcaccttcgttaagcccagcagcaccactgactttaaggagatgatcaac
gtcctagacgcgtctttacccgacagcgcctggacctttgagagccagcaggtgagcagt
aaacaacagcattgtgacgaataa
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