KEGG   Salvelinus namaycush (lake trout): 120063180
Entry
120063180         CDS       T07522                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    120063180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:snh03000]
    120063180
   04121 Ubiquitin system [BR:snh04121]
    120063180
   03036 Chromosome and associated proteins [BR:snh03036]
    120063180
Enzymes [BR:snh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     120063180
Transcription factors [BR:snh03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    120063180
Ubiquitin system [BR:snh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     120063180
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120063180
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     120063180
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like DUF7885 F-box PHD LRR_At1g61320_AtMIF1 Viral_cys_rich
Other DBs
NCBI-GeneID: 120063180
NCBI-ProteinID: XP_038869310
UniProt: A0A8U1H577
LinkDB
Position
Sna18:complement(17224750..17245149)
AA seq 779 aa
MALSLSADEEDYESESEQQHAANRPKPKMGTSAAVKLPSNRSASGARRRRTRCRKCEACL
RTECGDCHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCGEAGKEDSLEEEEDK
FNIMLMECSICSEIVHPNCLKVKDASGVVNDELPNCWECPKCNSAGKTGKVCKQKRGPGF
KYASNLPGSLLREQKAVKEEGESTSTSTVKRKPERDETPRHRPEEWEPLHRQPPVLSPST
LPRPRPEDKLRKKRKLFDDDYEEDFDVRKKGKSDGHLFINQIKTEEEEEVDEEEKASLYR
RGLERRGRLRDTEEEAEDGDDEDTKTSLPRPPLKTSVLDSDQSHCSSPWAGPSSEGGSEP
QEKGPRPKACRKRRLPNKELSKELSKALNQEIQKTEDCLANENRQPLKVEPESENEEPKR
SFRNGSDLGGERPHLWTKEINGTPWELRHFYPSQITPLGFNRSSPGTRPLPPRSPPKCVQ
MERHVIRPPPISPPPDRLPLVDGKTHAVQREVWVKIFGHVTHKELCVCMRVCKTWNRWCC
DKRLWTIIDLNRCKSITPLMLSGIIRRQPLSLDLSWTNISKKQLSWLINRLPGLRVLLLS
GCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRCKLRNVVD
LRLAGLDITDASLRLIIRHMPVLSQLDLSYCNHVNDQSVNLLTAAGTTTRDSLTEINLSV
CNRVTDHSLTFFKRCGSICHIDLRYCKQVTKTACEQFIAEMSVSVQFGLKEDKLLQKLG
NT seq 2340 nt   +upstreamnt  +downstreamnt
atggccttgtcactgagtgcagatgaagaggattatgaatcagaatctgaacagcagcat
gcagccaaccggccaaagcccaagatggggacgtcagcagcggtcaagctgccgtccaat
cgcagtgcgtctggcgccagacgcaggagaacacgctgccgaaagtgtgaggcgtgcctc
cgaaccgagtgtggagactgtcacttctgtaaagacatgaagaagtttggaggaccaggg
cgcatgaagcagtcctgtatcatgaggcagtgcattgcacctgtcctgccccacacggct
gtgtgtgttgtgtgtggagaagcaggtaaggaggactccctggaggaagaggaggacaag
ttcaacatcatgctcatggagtgctccatctgcagtgagattgttcaccccaactgctta
aaggttaaagatgcatctggcgtggtgaatgatgaactacccaactgttgggaatgtccc
aaatgcaactcagctgggaaaacaggaaaagtctgcaagcaaaaaaggggaccagggttc
aagtacgcgtccaacctccctggctctctgctgagggagcagaaggcggtcaaggaggag
ggcgagtccacctctacgtctacagtcaagaggaagcctgagagggatgagactcccaga
cacagacctgaggaatgggagccccttcacagacaaccccctgtcctgtcccccagcacc
ctgcctcggcccagacctgaggacaaactgaggaagaagagaaagctcttcgacgatgac
tacgaagaggactttgatgtgaggaagaagggaaagtcagatggacatctgttcattaat
cagatcaagactgaagaggaggaggaggtagatgaagaggagaaggcctctctgtaccgg
cgaggcctggagaggagagggcgtttaagagataccgaggaggaggcagaggacggggat
gacgaggacacaaagacaagcctgcccaggcctcctctcaaaacttctgttctagacagt
gaccagtctcactgcagctctccatgggctggccccagtagcgaggggggcagtgaaccc
caggagaagggcccacgtcccaaagcgtgccgcaaacgccgattaccaaacaaagagctg
agcaaagagctgagcaaagcactgaaccaggagatccagaagaccgaggactgccttgcc
aatgagaaccgccagcccctgaaggtggagccagagagtgagaatgaagagccaaagagg
agcttccgcaatggcagtgacctaggaggggagcggccacacctctggaccaaggaaatt
aacggcactccctgggagctgcgccacttctaccccagccaaatcacccctctgggcttc
aacaggagctcccctggcacccggcccctgcccccacgctccccacccaagtgtgtccaa
atggagcgccacgtcatccggccgccccccatcagccccccaccggatagactgcccctg
gtggacgggaaaacccacgcggtgcagcgagaggtctgggtgaagatcttcggacacgtc
acacacaaggagctgtgtgtctgcatgcgtgtctgcaagacatggaaccgatggtgctgt
gataaaagactgtggaccataattgatctgaaccgctgtaaatctatcactccccttatg
ctgagtggcatcatccgcagacagcccctctcactggacctcagctggaccaacatctcc
aagaagcaactaagctggcttataaaccgtttaccgggtctgcgggtgttgctgctctca
ggttgctcatgggtggctgtgtctgccctctgcacctctagctgccctctgctgcgcacc
cttgatgtgcagtgggtggaggggctcaaagatgcccagatgagggacctgctctcgcct
ccgaccgacaacagaccaggccagttggacaaccgttgtaagctgaggaacgttgtggac
ttgcgtctggccggactggacatcacagacgcctctctgcgtctgattatcagacatatg
ccggtactttcacaactggacctgagctactgcaaccacgtcaacgaccagtcggtcaac
ctgctgacggccgcagggaccacaaccagagactccctcacagagatcaacctgtcagtt
tgtaatagggtgacagaccattcccttaccttcttcaagcgctgtgggagcatctgtcac
attgacctacgctactgcaaacaggtgaccaagacggcctgtgaacagttcatagcagag
atgtccgtgagtgtacagtttggcctcaaagaggacaaattactgcagaaactcggctag

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