Salvelinus namaycush (lake trout): 120063834
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Entry
120063834 CDS
T07522
Name
(RefSeq) Bardet-Biedl syndrome 5 protein homolog isoform X1
KO
K16748
Bardet-Biedl syndrome 5 protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120063834
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
BBSome
120063834
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBL5
bPH_3
Vps36_ESCRT-II
GRAM
Voldacs
PH_TFIIH
POB3_N
Motif
Other DBs
NCBI-GeneID:
120063834
NCBI-ProteinID:
XP_038870075
UniProt:
A0A8U1H654
LinkDB
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Position
Sna19:complement(38137235..38144278)
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AA seq
342 aa
AA seq
DB search
MASMLDVLWEDRDVRFDITAQQMKMRPGEVLIDCLDSIEDTKGNNGDRGRLLVTNLRIIW
HSLALPRVNLSVGYNSIINITTRTANSKLRGQTEALYILTKSNNTRFEFIFTNVVPGSPR
LFTSVIAVHRAYETSKMYRDLKLRGALIQNKQLRLLPREEVYDKINGVWNLSSDQGNLGT
FFITNVRIVWHANMNESFNVSIPYLQIRSIRIRDSKFGLALVIESSQQTGGYVLGFKIDP
MDKLQDAVKEINSLHKVYSANPIFGVDYEMEEKPQPLEELTVDQPPDDVEIEPDEQTDAF
TAYFADGNKQQDREPMFSEELGIAVEKLKEGFTLQGLWEVMG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatgttggatgttctctgggaggatagagatgttagattcgatataaccgca
cagcaaatgaaaatgcgacctggcgaggtcttgatagactgccttgattccattgaagac
accaaaggaaacaatggggatcgagggaggctcctggtaacaaatctgaggatcatctgg
cattctttggctctgccaagagtcaatttgtctgttggatacaattccattattaacatc
acaacaaggacagctaactctaaattgagaggccagactgaagcactgtatatcttgaca
aagtctaacaatacaagatttgagttcattttcaccaatgtggttccagggagtccaaga
ctatttacatctgtcattgctgttcacagggcttatgagacctctaaaatgtaccgtgac
ctgaagctgagaggagctcttattcaaaataaacaactgaggcttttgcctcgagaggaa
gtgtatgacaaaatcaatggggtgtggaatttatccagtgaccagggtaatctagggacc
tttttcatcactaatgttcggatcgtgtggcatgccaatatgaacgagagcttcaacgtc
agcattccctatcttcaaattcgttccatcagaataagagactcaaagtttggcctagct
ttggtgatagaaagctctcagcagactggaggatatgtgcttggatttaagatcgaccca
atggataagcttcaagatgcagttaaagagatcaactcgctgcacaaagtctactctgcc
aaccccatctttggagtggactatgagatggaggaaaagcctcagccactggaggagctg
acagtggaccagccccctgatgatgtggaaattgagcccgatgagcagactgatgctttc
actgcttactttgctgatggcaataagcaacaagaccgggaacctatgttttctgaggag
ctgggaattgcagttgaaaagttgaaggaggggttcacacttcaaggactctgggaagtc
atgggctga
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