Salvelinus namaycush (lake trout): 120063931
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Entry
120063931 CDS
T07522
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120063931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120063931
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
120063931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
120063931
NCBI-ProteinID:
XP_038870169
UniProt:
A0A8U1F5Y3
LinkDB
All DBs
Position
Sna19:21570868..21672055
Genome browser
AA seq
1591 aa
AA seq
DB search
MWQQRDKSKKGVWESCIGDYPTNTQHHRVPCLWSRGLGFLTPVLSHQSLTPLSSGTTVPG
NQQHSALSQRSLLHVDTDSLLSTMDTSALTATEKKEHKGSGLDGSSFSDLPKKPSPTTVT
RGPHHLFPTFHTPIPIDMRHHEGRYHYEPHPLHTMHGPQGLASSPVISDGISLIRLSPQA
AGTGESPFSPPHPYINHHMEHYLRSMHSSPTLSMISAARGLSPAEVTHEHLKERGLFSLP
PPPPGANPTQYYHLMASGRSTYGDLLLQTGAAAAAAAAAAHLPDYISSVDVSRFSSPRLT
PRLNRKRALSISPLSDASIDLQTMIRTSPNSLVAYINNSRSSSAASSSYGHLSVSGISPS
FTFPHSINPMAYQQLFNQQRGLSAFGHTPPLIQPSPSFAARQHAHAIAASALNTTHNTSS
SESNQNAGGDPAVSSTVKPMITKRHKVKIEAEGPRSISPCSQEHVLDLSEERDKDEWKQE
PEAVYETNCHWDGCTKEYDTQDQLVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYML
VVHMRRHTGEKPHKCTFEGCCKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDR
AKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDVPPRGPPK
GNGENEANAKQSDRGVDGKMEANSITRGVEDCLQVKSIKTENSMTYQSSPGGHSSCSSEP
SPLGSAHNNDSGVEIALHSGGSFGELSALDDPPMVDSSTLSHGNSAGVGLGLRKGGGVTI
KLENIKKERLKNVRDSCPWTNSGPQIRNTKLPPIPAVGSLLENSNMIAPPGPYPGQRLGD
LSSCEVTMLNQLNEQARRYSNTSTASSAYTSRRSSGISPCYSSRRSSEASQFSNRHNNIS
SADSYDPISTDLSRRSSEASQCGGGGGNIPSLLSLTPAQHYHLKAKYAAATGGAPPTPLP
NMERMSLRTRMALYGDHSQERESSSHSNQFQPPAGAVPRRCSDIGYSNHSMMPHEVPGNL
PRRASDPVRRPTLDPLSLPRVQRYNSMNSMNPNSMMPPPSTDRRGLAMQGYTRSDGSLHR
HSFAPRPPSISENVVMETMAVDGLDPAGDEDMVLPDDVVQYLRSQNTGADQSAGPADYTN
SQSHGFQDQGNMTSSQQPQQQFYGQRRMAMVDTNMPLSESGQAPLTPYKMSPGSGSQQQQ
YPTSPSMNNKNNMPVQWNEVSSGTVDATGTSRVTKQNLLRNNNLAVVQQRQNCGPFQGSM
GSNSNQQVMPMSQNMELQGYSQRSNAQRINSVQQQQRQPCSMNYTEQKSPQQGYGQDIVP
IPNSGSGNGSLRPNYNGMALPNGRVMATHNPDIQNYRSRTQVESYPPHMNQVEQLNYSST
PQQQAVHTGTRDGMQPRLPMETKSMSRQHVRSSSTMQNRFLQSDFNHNTSEASPKKPGRT
AAHNVGQKGNSNSNAPMLYTGQIHMFESNNNLSFDSPMSPCTPQAPVGTAVFMASSGVNQ
VTSTVDSSGVEHAQIDFDAMLDDGDHSSLMSGTLSPRLLTSLSQNSSRLTTPRSSVTLAS
VPAGIGNMAIGDMNSMLTALAEESKFLNMMS
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagcagagggacaaatccaagaaaggagtctgggagtcctgtataggggattat
cccaccaacacccagcaccatagagtcccctgcctgtggtcacgtggactggggttcctg
acacctgtactgtcccatcagagcctgacacccctgtcttcagggacgacggtgcctggc
aaccagcaacactctgcattatctcagagaagtctgcttcatgttgacacggactccctg
ctgtccactatggatacctctgctcttacagccactgagaagaaggagcacaagggatca
ggtctggatggaagcagcttctcagacctgccaaagaaaccgtctcctactacagttacc
agaggtcctcaccatctcttccccacgtttcacacaccgatcccgatcgacatgcgtcac
catgaggggaggtaccattacgagccacaccccctccacaccatgcatggacctcaaggc
ctagccagcagcccagtcatctcagacggcatctctctgatccgtctgtcccctcaggca
gcagggacgggggagtcccccttcagcccccctcacccctacatcaaccaccacatggag
cactacctccgctccatgcacagcagccctaccctatccatgatctcagctgcccgtgga
ctcagccccgcagaagtgacccatgagcacctgaaggagcgtggtctgttcagcctgccc
cctccccctccaggggccaaccctacacagtactaccacctcatggccagtggcagaagc
acctacggagacctcctattgcagaccggggcggccgcggcagcagcagccgcagcagca
cacctgcccgactacatcagctctgtggacgtgtccaggttctccagccccagactgacc
cccaggctgaacaggaagcgagccctgtccatctcccctctctcagacgccagcatcgac
ctgcagaccatgatccgtacctcgcccaactctctggtggcttacatcaacaactcacgc
tccagctctgcagccagcagctcctacggacacctgtcagtcagcggcatcagtccgtcg
ttcaccttcccccactccatcaaccccatggcataccagcagctgttcaaccaacagaga
ggcctgagtgcgttcggccatacccctcccctcatccagccctcgccctccttcgctgcc
cgccagcatgcccacgccattgcagcctccgcactcaacacaacccacaacacctccagc
tctgagtccaaccagaatgctggtggcgacccggcggtgagcagcacagtcaagcccatg
atcaccaagaggcacaaggtcaagatagaagcagagggaccccggtccatatcaccgtgc
tctcaggagcatgtcctggacctgagtgaggagcgggataaagatgagtggaagcaggag
ccagaggctgtctacgagaccaactgtcactgggacggctgcaccaaggagtacgacacc
caggaccagctcgttcaccacatcaacaacgaccacatccatggggagaagaaagagttt
gtgtgccgttgggatgagtgctcgagagaacagaagcccttcaaagctcagtacatgctg
gtggtccacatgaggagacacactggggagaagccacacaaatgcacatttgaaggatgc
tgtaaggcctactctcgcctggagaacctgaagacccacctgaggtcccacacaggggag
aagccgtacgtctgtgaacatgagggctgcaacaaagccttctccaacgcctcagacaga
gccaagcaccagaaccgcacacactccaatgagaaaccctacatctgtaaaatccctggg
tgcactaaacgctacacagaccccagctctctcaggaagcatgtgaagacggttcacgga
ccagaggcccacgtcaccaagaaacaacgtggcgatgtgcctcccaggggtcctcccaag
ggaaatggagagaacgaggcaaatgccaaacagagtgatagaggggtagatggaaagatg
gaggccaacagcattactagaggagtggaggactgcctgcaggtcaagtcaatcaagacc
gagaactcgatgacgtatcaatccagccctggcggtcactcgtcatgtagcagtgagcca
tcgccacttggcagtgcccacaacaatgacagtggagtagagatagccctgcacagcggg
ggcagctttggggagctgagtgcactggatgaccctcccatggtagactcctccaccctc
tcccacggcaactcagcaggggtggggcttgggctccgtaaagggggaggagtcaccatc
aagctggagaacatcaagaaggagaggctgaagaatgtgagagactcgtgtccctggacc
aactctggtccacagatccggaacaccaagctgcctcctattcctgctgttggttccctt
ctggagaactccaatatgatcgctccacccgggccctaccctggtcagcgtcttggtgac
ctgtcatcatgcgaggtgaccatgctaaaccagctgaatgagcaggcccgccggtacagc
aacaccagcactgccagttcagcctacaccagccgccgctcctcgggcatctccccctgc
tactccagccgccggtcttccgaagcttcgcagttcagcaaccgccacaacaacattagc
tcagccgactcctacgaccccatctccacagacctgtcccggagatccagcgaggccagc
cagtgtggagggggtggtggaaacatccctagtttgctcagcctcaccccggctcagcac
taccatcttaaggccaagtatgctgccgcaactgggggagctccacccacacctctgccc
aacatggagcgcatgagcctcaggaccaggatggccctgtacggggaccactcccaggag
agggagagctcctcccattccaaccagttccagccccctgctggagcagtgcccagacgc
tgcagtgacattggctacagtaaccatagtatgatgccccacgaggtccctgggaacctg
ccacggcgagccagcgatcccgtccgcagacccaccttggacccactgtccctgccgagg
gtccagcgctacaacagcatgaacagtatgaaccccaactccatgatgcctcctccctct
actgatcgccggggcctggctatgcagggctacacacggtccgacggaagtctgcaccgc
cactctttcgccccgcggccccccagcatctcagagaatgtggtgatggagaccatggct
gtggacgggctggaccctgcaggggacgaggacatggtgctgcctgatgatgtcgtacag
tatctcaggtctcagaacactggcgccgaccaatcagcaggccccgccgactacaccaac
agccaatcacacggcttccaggaccaagggaatatgacctcctcccagcagccccagcag
cagttctatgggcaaaggaggatggccatggtggataccaacatgcccctgtctgagtca
ggccaggcccccctaacgccctacaagatgagccctggttctggatcacagcaacagcag
tacccaacctcacccagtatgaacaacaaaaacaacatgccagtgcagtggaatgaggtc
agctcagggactgtggacgccacaggcacctcaagagtcaccaagcagaacctcctcaga
aacaacaacctggcagtggttcagcagagacaaaactgtgggcctttccagggtagtatg
ggtagtaacagtaaccagcaggtgatgcctatgagccagaacatggagctacaaggctac
agccagagaagcaacgcccaaaggatcaactctgtccaacagcaacagaggcagccatgc
agcatgaattatactgagcagaagagtccccagcagggatacggccaagacattgtcccc
atccctaactctggatctgggaatggcagcctacgacccaactacaacggcatggcactg
cccaatggcagagtaatggcaacacataatccagatattcaaaactacagatcaaggact
caggttgaaagctatccccctcacatgaatcaggttgagcagctgaactacagtagtacg
cctcagcagcaagccgtccatactgggaccagagatgggatgcagcccaggcttcccatg
gagaccaagtctatgtccagacaacatgtaagatccagcagtacgatgcagaaccgtttc
cttcagtctgacttcaatcacaacacctctgaggccagtccaaagaagccaggccgcacc
gcagcacataacgtcggacaaaagggaaactccaactctaacgctccaatgttatacact
ggccagatacacatgttcgagtccaacaacaacctgagtttcgactcccccatgtccccc
tgcacaccccaggcaccggtaggcactgccgttttcatggcatcttcaggggtcaaccag
gtcaccagcaccgtggactcctctggtgtggagcacgcccagattgactttgatgccatg
ttggatgatggcgaccactccagcctgatgtcggggactctcagccccaggctcctcaca
agtctgtcccagaactcctccaggctcaccaccccccgtagctctgtgaccctggcctcc
gtgccagcagggatcggtaacatggccataggcgatatgaactccatgttgaccgccctg
gctgaggagagtaagttcctcaacatgatgagctaa
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integrated database retrieval system