Salvelinus namaycush (lake trout): 120064230
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Entry
120064230 CDS
T07522
Symbol
vdrb
Name
(RefSeq) vitamin D3 receptor B isoform X1
KO
K08539
vitamin D3 receptor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120064230 (vdrb)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120064230 (vdrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120064230 (vdrb)
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120064230 (vdrb)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120064230 (vdrb)
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
120064230 (vdrb)
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Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
DUF7206
DUF3795
Motif
Other DBs
NCBI-GeneID:
120064230
NCBI-ProteinID:
XP_038870593
UniProt:
A0A8U1F682
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All DBs
Position
Sna2:48101107..48163957
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AA seq
453 aa
AA seq
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MLLKIKDIFMVKKRVAKSLSPINKQGHAKISVMETTAVSTTTLANDEFDRNVPRICGVCG
DKASGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIG
MMKEFILTDEEVQRKKDLIQRRKDEEAQREAQRPRLSEEQSQVIATLVDAHHKTYDDSYS
DFNRFRPPVREGPVTRSASRAASLHSLSDASSDSFSHSPESVDTKLMNFSNLLMMYQEQG
GSPDSDDDGSKLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAIEVIM
LRSNQSFNLEDMSWSCGGPDFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVL
LMAICLLSPDRPGVQDHGRIETLQDRLSETLQAYIQLHHPGGRLVYAKMIQKLADLRSLN
EEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcaagattaaagatatctttatggttaagaagagagttgccaagtctttatca
cccatcaacaaacaagggcatgccaaaatctcagtaatggagactacggctgtgagtacc
accactctggccaatgatgagtttgacaggaacgtgccgcggatctgcggtgtgtgcggg
gacaaggcctccggattccacttcaatgccatgacctgcgagggctgcaagggcttcttc
agacgcagtatgaagcgcaaggccagcttcacctgtcccttcaacggcagttgcaccata
accaaggacaaccgccgccactgccaggcctgccggctcaagcgctgcgtggacatcggc
atgatgaaggagttcattctgacagacgaggaggtgcagaggaagaaggatctgatccaa
cggaggaaggatgaggaggcgcagagggaggcgcagcgaccccggctgagcgaggagcag
agccaggtcatcgccacgctggtggatgctcaccacaagacctacgacgactcctactcc
gacttcaaccgcttcaggcctccggtccgagaaggcccagtgacacgcagtgccagcaga
gctgcctctctccactctctatctgatgcctcatctgactccttcagccactctccagag
tcggtggacactaagctgatgaacttcagtaacctactgatgatgtaccaggagcagggg
ggcagcccggactccgacgacgacggctccaagctctccatgctgccccacctggccgac
ctggtcagctacagcatccaaaaggtcatcggcttcgccaagatgatccctggcttcagg
gagctgacggctgaggaccagattgccttgctcaagtcgagtgccatcgaggtgataatg
ctgcgctccaaccagtccttcaacctggaggacatgtcctggagctgcggagggcccgac
ttcaagtactgcgtcaacgacgtcactaaagcgggccacactctggagctgctggagcct
ctggtcaaattccaggttggcctgaaaaaactcaacctccacgaggaggaacacgtgctg
ctcatggccatctgcctactctccccagaccgtccgggcgtgcaggaccacgggcgcatc
gagaccctgcaggaccgtctgtcggagacgctgcaggcctacatccagctgcaccacccg
ggcggccgcctcgtgtacgccaagatgatccagaagctggcggacctgcgcagcctcaac
gaggagcactccaagcagtaccgctcgctgtccttccagcccgagcacagcatgcagctg
accccgctggtgctggaggtgttcggcagcgaggtctcctaa
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