KEGG   Salvelinus namaycush (lake trout): 120064230
Entry
120064230         CDS       T07522                                 
Symbol
vdrb
Name
(RefSeq) vitamin D3 receptor B isoform X1
  KO
K08539  vitamin D3 receptor
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:snh01009]
    120064230 (vdrb)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:snh03000]
    120064230 (vdrb)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:snh03310]
    120064230 (vdrb)
Protein phosphatases and associated proteins [BR:snh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120064230 (vdrb)
Transcription factors [BR:snh03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    120064230 (vdrb)
Nuclear receptors [BR:snh03310]
 1. Thyroid hormone like
  1I. Vitamin D3 like receptor
   120064230 (vdrb)
SSDB
Motif
Pfam: zf-C4 Hormone_recep PCF11_charged DUF7206 DUF3795
Other DBs
NCBI-GeneID: 120064230
NCBI-ProteinID: XP_038870593
UniProt: A0A8U1F682
LinkDB
Position
Sna2:48101107..48163957
AA seq 453 aa
MLLKIKDIFMVKKRVAKSLSPINKQGHAKISVMETTAVSTTTLANDEFDRNVPRICGVCG
DKASGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIG
MMKEFILTDEEVQRKKDLIQRRKDEEAQREAQRPRLSEEQSQVIATLVDAHHKTYDDSYS
DFNRFRPPVREGPVTRSASRAASLHSLSDASSDSFSHSPESVDTKLMNFSNLLMMYQEQG
GSPDSDDDGSKLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAIEVIM
LRSNQSFNLEDMSWSCGGPDFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVL
LMAICLLSPDRPGVQDHGRIETLQDRLSETLQAYIQLHHPGGRLVYAKMIQKLADLRSLN
EEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgttgctcaagattaaagatatctttatggttaagaagagagttgccaagtctttatca
cccatcaacaaacaagggcatgccaaaatctcagtaatggagactacggctgtgagtacc
accactctggccaatgatgagtttgacaggaacgtgccgcggatctgcggtgtgtgcggg
gacaaggcctccggattccacttcaatgccatgacctgcgagggctgcaagggcttcttc
agacgcagtatgaagcgcaaggccagcttcacctgtcccttcaacggcagttgcaccata
accaaggacaaccgccgccactgccaggcctgccggctcaagcgctgcgtggacatcggc
atgatgaaggagttcattctgacagacgaggaggtgcagaggaagaaggatctgatccaa
cggaggaaggatgaggaggcgcagagggaggcgcagcgaccccggctgagcgaggagcag
agccaggtcatcgccacgctggtggatgctcaccacaagacctacgacgactcctactcc
gacttcaaccgcttcaggcctccggtccgagaaggcccagtgacacgcagtgccagcaga
gctgcctctctccactctctatctgatgcctcatctgactccttcagccactctccagag
tcggtggacactaagctgatgaacttcagtaacctactgatgatgtaccaggagcagggg
ggcagcccggactccgacgacgacggctccaagctctccatgctgccccacctggccgac
ctggtcagctacagcatccaaaaggtcatcggcttcgccaagatgatccctggcttcagg
gagctgacggctgaggaccagattgccttgctcaagtcgagtgccatcgaggtgataatg
ctgcgctccaaccagtccttcaacctggaggacatgtcctggagctgcggagggcccgac
ttcaagtactgcgtcaacgacgtcactaaagcgggccacactctggagctgctggagcct
ctggtcaaattccaggttggcctgaaaaaactcaacctccacgaggaggaacacgtgctg
ctcatggccatctgcctactctccccagaccgtccgggcgtgcaggaccacgggcgcatc
gagaccctgcaggaccgtctgtcggagacgctgcaggcctacatccagctgcaccacccg
ggcggccgcctcgtgtacgccaagatgatccagaagctggcggacctgcgcagcctcaac
gaggagcactccaagcagtaccgctcgctgtccttccagcccgagcacagcatgcagctg
accccgctggtgctggaggtgttcggcagcgaggtctcctaa

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