Salvelinus namaycush (lake trout): 120064371
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Entry
120064371 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
snh04144
Endocytosis
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120064371
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120064371
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120064371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120064371
04121 Ubiquitin system [BR:
snh04121
]
120064371
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120064371
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
120064371
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120064371
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
120064371
NCBI-ProteinID:
XP_038870840
UniProt:
A0A8U1H6Y4
LinkDB
All DBs
Position
Sna2:50730876..50800833
Genome browser
AA seq
870 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDGQSKKTEKCNNTHNPKWKQSLTVILTP
FSKLIFRVWSHQTLKADILLGMATLEISETLKSNDMKLSEVVQTLQLCSDRDHTDVVGDL
SVCLDGMQVDPETFTSAERDHVAVPNGEVRQNGDSVNSDNIPPRSSRDTSPSSDSTEDWV
IVPNGHTVNSMGSPAPSPGGSKSTRPPRPARPPPPTPRRPAASPASSSSSTHSEVSEPPA
SYGSSLASASGASSDPPQENGAAPPQAASTPPAIGAPAGAPPAGGPPRVIPNGPLPPGWE
QRVDQNGRMYFVDHIEKRTTWDRPESLPSGWERRVDPMGRVYFVDHITRTTTWQRPTQES
VRNYEEWQHQRSQLQGAMQQFNQRFIFGLQDQQIAAANKEFDPLGPLPHGWEKRTDTNGR
VYFVHHTTRMTQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGK
SSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDSFQQMMSFHPQDL
RRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPD
HLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKD
NNLEECGLEMYFSVDKEILGEVTTHELKPDGGNVLVTEENKEEYIRLVAEWRLSRGVEEQ
TQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLVDWQRHTIYRHYARSSKQILWFW
QFVKEMDNEKRMRLLQFVTGTCRLPMGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFN
RLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaactacaagttactgtgctgtcggccaaactgaaggagaacaaaaagaac
tggtttggccccagtccgtacgtggaggtggctgtggacggtcagtcgaagaagaccgag
aaatgcaacaacacacacaaccccaaatggaagcagtcactgacagtaattctcacacct
ttcagtaagctcattttccgggtatggagtcatcagacgctgaaggccgacatcttattg
ggaatggctacattggagatcagtgaaaccctaaagtccaatgatatgaaactctctgag
gtggtgcagaccctgcagctgtgttcagaccgagaccacactgacgtggtgggggacctg
tcagtctgtctggacggcatgcaggtggacccagagacattcacctctgcagagagggac
catgttgctgttccaaacggggaggtgagacagaacggagatagtgtcaacagtgataac
ataccacccagatccagcagggacacgtccccctccagtgactccacagaggactgggtc
atcgtccccaacggccacacggtcaacagcatgggttctcctgccccatccccagggggc
tccaagtccacacggccccccagacctgcacggcctcccccacccaccccccgcagacca
gccgcttccccagcctcctccagcagctctacccatagcgaggtgagtgagcccccggct
tcatacggctcgtccctggcctcggccagcggggcctcctcagacccccctcaggagaac
ggagctgcacccccacaggcagccagcacccccccggccatcggggcaccagctggtgca
cccccagccggtgggcccccccgagtcatccctaacggcccactgcctccaggctgggag
cagagggtggaccagaatggccgcatgtatttcgtggatcacattgagaagaggacgaca
tgggaccgaccagagtctctcccctctggttgggagcggcgtgtggaccccatgggcagg
gtgtacttcgtggaccacatcacccggaccaccacgtggcagcgccccacgcaggagtct
gtgcgcaactatgaggagtggcagcaccagcgcagccagctgcagggggccatgcagcag
ttcaaccagaggttcatttttgggctccaggatcagcaaatagctgcagcaaacaaagag
tttgacccacttgggccgctgccacacggctgggagaagcgaacagacaccaacggcagg
gtttattttgttcatcacacaacgcggatgactcagtgggaggacccacggacacaaggg
ctgctgaatgacaagcccctacctgaaggctgggagatgaggttcacagtggatggcatc
ccctactttgtggaccacaaccggagaaccaccacctacatcgaccctcgcacgggcaaa
tcatcccttgagaacgggccccagatcacctacgtcagggacttcaaagccaaagtgcag
tacttcaggttctggtgtcagcaactgtcaatgccacagcacatcaagatcaccgtcacc
cgcaaaaccctgtttgaggattcattccagcaaatgatgagctttcatccacaagatctc
agacggagactgtggataattttccccggagaggaaggcttggactacggaggagtggca
agggagtggttcttcttgctatcccacgaggtgctgaacccaatgtactgcctgtttgag
tatgccggcaaggacaactactgtctccagatcaaccctgcctcctacatcaaccccgac
cacctcaagtacttcaagttcattggacgattcattgccatggccttgttccatgggaag
ttcatcgacacgggattctccctgcccttctacaagcgcatcctgaacaaacccctggcc
ctgaaggacctggaatccatcgacccggaattctacaactccctcatctggatcaaagat
aacaacttggaggagtgtggtctggagatgtacttctctgtggacaaggagatcctgggg
gaggtcaccactcacgagctgaagccagacggaggcaatgtcttggtcactgaggaaaac
aaagaggaatacatcaggctggtggcagagtggaggttgtccagaggggtggaggagcag
acccaggccttcttcgagggctttaatgaggtcctcccccagcagtacctgcagtacttt
gacgccaaggaactggaggtgatgctgtgtggcatgcaggagatagacctggtggactgg
cagaggcacaccatctacaggcactacgcacgcagcagcaagcagatcctctggttctgg
cagtttgtgaaggagatggacaatgagaaacgtatgaggctgctgcagtttgtcaccggc
acctgtcggcttcccatgggcggcttcgctgacctcatggggagtaatggcccacagaag
ttctgcattgagaaggtgggcaaagaaaactggcttccaagaagtcacacttgctttaat
cgactggacctgcccccctacaagagctacgagcagctgaaggaaaagctgatgtttgcc
attgaggaaactgagggcttcggacaggagtag
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