Salvelinus namaycush (lake trout): 120065186
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Entry
120065186 CDS
T07522
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00600
Sphingolipid metabolism
snh00604
Glycosphingolipid biosynthesis - ganglio series
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120065186
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
120065186
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120065186
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
120065186
Glycosyltransferases [BR:
snh01003
]
Glycan extension
Glycolipid
120065186
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Glyco_transf_64
Motif
Other DBs
NCBI-GeneID:
120065186
NCBI-ProteinID:
XP_038871900
UniProt:
A0A8U1F9E2
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Position
Sna20:27821299..27839558
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AA seq
547 aa
AA seq
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MADRRRLLSEWIQAVGMRSLRKTVLLAIVASVVLVVALLHSWPTRAYTTVDVWQRPGPAV
ERHLEERFPEPDHRSANIPYRVKESIAGLLARNGCVCEGESGGMNLPFAQLLFPRVSAHP
MHTAFEASELEEMKKRRAKEYQGFQMRSQTPADMLIVAEANNPLQYPTQGMEVRPLKTIL
IPGLAVQDHPKELYTVNFTSTLGTLNVAAEVEGVKVKGDGEMHMTLTSSLLSNLNRQLQF
VTYTNTLFHPSTADTVQFETEGHQAMFTIKVRHGVTPKLYNTGPKGEYNISALVTIATKT
FMRYDKLQGLIDSVRKYYSTVTIVIADDSENPKTVSGPYIEHYIMPFGKGWFAGRNLAVS
QVTTKYVLWVDDDFIFTANTKLEKLVDVLERTTLDLVGGAVREATGYTATYRQTISIEPG
EEEGDCLHMRRGFHHIIQGFPNCVVTDGVINFFLARTDKIQQVGFDPRLARVAHLEFFID
GLGSLHVGSCDDVIVNHATKIKLPWVSQSESDKTYAKFRYPPASSDATHTKNGLLYFKNR
FQCLTHN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaggagacgtcttctctctgagtggatacaggcagtagggatgcgttcctta
aggaagacagtgttgttggccattgtggcatctgtggtgttggtggtggccctcctccat
tcctggcccacccgggcctacaccaccgtggatgtctggcagagaccagggcctgcagta
gagaggcacctggaggagaggttcccagaaccagaccacagatctgccaacatcccctat
cgcgtgaaggagagtattgcaggtctgttggcacgtaacgggtgtgtgtgtgaaggtgag
agtgggggcatgaacctgccctttgcccagctgctgttcccccgggtgtcagcccacccc
atgcacactgcatttgaggcttctgagctggaagagatgaagaaacgaagggccaaggag
taccagggcttccagatgaggtctcagactcctgcagatatgctcatcgtggccgaggcc
aacaatcctctgcagtacccaacacaggggatggaagtacggccgctcaaaaccatcctc
atcccaggacttgcagtacaagaccatcccaaagagctgtacacagtcaacttcacctct
accctgggaacgttaaacgtggcagcggaggttgagggggtaaaggtcaaaggtgacggg
gagatgcacatgaccctgaccagcagcctgctgtccaatttgaaccggcagctacagttt
gtcacctataccaacacactgttccaccctagtacagcagacacagtgcagtttgagaca
gagggtcaccaagccatgtttactatcaaggtccgtcatggtgtaactccaaaactctac
aacacgggacccaaaggggaatacaacatcagtgcccttgttaccatagcaaccaaaacc
ttcatgcgctatgacaagctccaaggtctcatcgacagtgtgcgaaaatactattccact
gtcaccatagtaatagctgatgacagtgaaaacccaaagacagtctctggcccctacatc
gaacattacatcatgccatttggaaagggctggtttgcaggacggaacctagccgtttcc
caggtgactaccaagtatgtgctgtgggtggacgatgacttcatcttcacggccaacacc
aagctggagaaactggtggacgtcctggagaggactaccctggacctggtgggtggtgca
gtgcgggaggccactggctatactgccacctacaggcagaccatctccattgagccaggg
gaggaggagggtgactgcttgcatatgcggaggggcttccaccacatcatccagggcttt
ccaaactgcgtagtcacggacggggtcatcaacttcttcctggcccgcacagacaaaatc
cagcaagtgggctttgacccccgtctggccagagtggcccacctggagtttttcatcgat
ggcctcggctcgcttcacgtgggatcctgtgatgatgtcatcgtcaaccacgccaccaag
atcaagcttccctgggtcagccaatcagagagtgacaagacgtatgccaagttccgctac
ccaccagcctcctcggatgccacacacaccaaaaacggcctcctctatttcaagaaccgc
ttccagtgtttgactcacaattaa
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