Salvelinus namaycush (lake trout): 120065408
Help
Entry
120065408 CDS
T07522
Name
(RefSeq) vitamin D3 receptor B-like isoform X1
KO
K08539
vitamin D3 receptor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120065408
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120065408
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120065408
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120065408
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120065408
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
120065408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF7206
DUF3795
Motif
Other DBs
NCBI-GeneID:
120065408
NCBI-ProteinID:
XP_038872324
UniProt:
A0A8U1H655
LinkDB
All DBs
Position
Sna20:45438246..45536536
Genome browser
AA seq
462 aa
AA seq
DB search
MTKRIRDILMVKRVVKSLSAIYKQGHAKISVMENTAVSTSTLANEEFDRNVPRICGVCGD
KATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIGM
MKEFILTDEEVQRKKDLIQRRKDEEAQREAQREAQRPRLSEDQSQVIATLVEAHHKTYDD
SYSDFNRFRPPVREGPVTRSASRAASLHSLSDASSDSFSHSPESVDTKLMNFSNLLMMYQ
DQGGSPDSNDDDGSTLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAI
EVIMLRSNQSFNLEDMSWSCGGPDFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEE
EHVLLMAICLLSPDRPGVQDHGRIEALQDRLSETLQAYIRLHHPGGRLVYARMIQKLADL
RSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEFTRVSPI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaggattagagatatattaatggttaagagagttgtcaagtctttatccgcc
atctacaaacaagggcatgccaaaatctcagtgatggaaaatacggctgtgagtacctcc
actctggccaatgaagagtttgacagaaacgtaccgcggatctgcggtgtgtgcggggac
aaggccaccggtttccacttcaatgccatgacctgcgagggctgcaagggtttcttcaga
cgcagtatgaagcgtaaggctagcttcacatgccccttcaacggcagttgcaccatcacc
aaggataaccgccgccactgccaggcctgccggctcaaacgctgcgtggacatcggcatg
atgaaggagttcattctgacagatgaggaggtgcagcggaagaaagatctgatccagcgg
aggaaggatgaggaggcgcagcgagaggcacaaagggaggcgcagcgaccccggctgagc
gaggaccagagccaggtcatcgccacactggtggaggcacaccacaagacctatgacgac
tcctactccgacttcaaccgcttcaggcctccagtccgtgaaggcccagtgacacgcagt
gcaagcagagctgcttctctccactctctgtctgatgcctcatctgactccttcagccac
tctccagagtctgtggacactaagctgatgaacttcagtaacctgctgatgatgtaccag
gaccagggtggcagcccggactctaacgacgacgacggctccacgctctccatgttgccc
cacttggccgacctggtcagctacagcatccagaaggtcatcggtttcgctaagatgatc
cccggtttcagggagctgacggctgaggaccagatcgccctgctcaagtcgagcgccatc
gaggtgatcatgctgcgctcaaaccagtccttcaacctggaggatatgtcctggagctgt
ggtgggcccgacttcaagtactgcgtcaacgatgtcactaaagcgggccacactctggag
ctgctggagcccctggttaaattccaggtgggccttaagaaactcaacctccacgaggag
gaacatgtgctactcatggccatctgcctcctctccccagaccgtcctggcgtgcaggac
cacgggcgtatcgaggcactgcaggaccgtctgtcggagacgctgcaggcctacatccgg
ctgcaccacccgggcggccgcctggtgtacgctaggatgatccagaagctggcggacctg
cgcagcctcaacgaggagcactccaagcagtaccgctcgctgtccttccagccagagcac
agcatgcagctcaccccgctggtgctggaggtgttcggcagcgagttcactcgcgtttcg
cccatctga
DBGET
integrated database retrieval system