Salvelinus namaycush (lake trout): 120065579
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Entry
120065579 CDS
T07522
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120065579 (pkp1b)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
120065579 (pkp1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_EZ
Atx10homo_assoc
Adaptin_N
Arm_2
U3snoRNP10
Motif
Other DBs
NCBI-GeneID:
120065579
NCBI-ProteinID:
XP_038872570
UniProt:
A0A8U1F9X6
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Position
Sna20:complement(10541611..10560421)
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AA seq
742 aa
AA seq
DB search
MMTMDPLKSAMSIGNVDETSLALPSDKKLRSKQQRVLDQVQTIKRGKSKYSKNGSVSSPP
TSPTSPVYINIFADSFKSPTSLNGGAFFNGTNGLSKTHLLNYFVLQLSYEKSTKRRVVAS
KESMVQRNMSSSSQWERRFPLSPTIGKHNSSRSQQQQQSSAPARQLQPNRSSVFLSERNS
SQVISNGNSSSQVAVKGNGVQKRTSQLIGTRQTKSSGQITSSQGRIERAPSNLSVAESKI
SGMKSKGEAGINGNGQIADITMKEAVEYLSSGDENYQLCGASVIQHATYSEDKAKQEVLR
LKGIPPLVNLLRSPSPQVQQTASATLRNLAFKDADNKEEVQRCGGITEALALLRDTDSTE
TQKQLTGLLWNLSSADSLKPELVRSALPVLTETVVVPYTGDETNSNQDPEVFYHATACLR
NLSCATQGNRQAMRNCRGLVDSLVSYVQRCVAAERPDDKSVENCVCVLHNLSFQLESEAP
ALFSRITALARTPSRANTPSETGPIGCFSPQSSKVQEQESHFDYPVMEEQNPKGAGWLFH
SKTMQSYLSLLGSSQREETLEACSGALQNLTANQGIVSSVMSQSIVQKLNGLPHISPLLQ
SSNPSLQKTAVSLVGNLAKNQRLQSTMARQTLPELVGILSSWTKKETEFDYTLAMACQTS
HSLLMKEPELGKPLLTNKLVNSVNDLSKNRGFPKASKAAGVLLYSLWSEKDVQSFLKKQG
MNKGSFVNDITSAAHRSVQVIE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggacccgttgaaatcggccatgtccatcgggaatgtggatgagacatct
cttgctttaccatccgataaaaaacttcggtccaaacagcagcgagtcttggatcaggtg
caaaccatcaagaggggcaagtcgaagtacagtaaaaatggatctgtgtcgtcgccaccg
acatccccaacgagtcctgtgtacatcaacatattcgctgactcctttaagtcacctacc
agtctcaatggaggggccttctttaatggtacaaatggcctctcaaaaacgcatttactc
aattacttcgtcctgcagctcagctatgagaaaagcaccaagcgaagggtcgtggcctcc
aaggaatctatggtccagaggaacatgagcagctccagccagtgggagagacgattccct
ctcagccccaccataggcaagcacaacagcagccgcagtcagcagcaacagcagtcctcg
gcccctgcccggcagctccagcccaacaggtccagcgtcttcctgtccgagaggaacagc
agtcaggtcatctccaatggcaacagctcctctcaggtcgctgtcaaaggtaatggggtg
cagaaaaggaccagccagttgattggcacgcgtcagacgaaaagtagtggccagattacc
agcagccaaggtcgtattgagagggcaccctctaacctctccgtggccgagtccaagata
tcagggatgaagagcaagggtgaagcggggattaatggtaatggtcagatagctgatata
accatgaaggaggcggtggagtacctgtccagtggagatgagaactaccagctctgtgga
gcctccgtcatccaacacgcgacctactcagaggacaaggccaagcaggaggtgttgcgg
ctcaaagggatcccccctttggtgaacctgcttaggagtcccagtccccaggtccaacag
actgcctccgccaccctgcggaacttggcctttaaagatgcagacaacaaggaggaggtc
cagcgctgtgggggcatcactgaggcactggccctgctccgagacacagactctactgag
acacagaaacaactcacaggtctcctttggaacctgtcatctgcagacagtctgaagcca
gagctggtgcgtagtgctctgcctgtcctgactgagactgtggtagtaccatacactgga
gatgagacaaacagcaaccaggacccagaggtcttctaccatgctacggcatgtctacga
aacctgagctgtgcgactcaaggcaacaggcaggccatgcgtaactgtcgaggcctcgtc
gactctctggtcagttacgtccagcgctgtgtggctgcagagaggccagatgacaagtct
gtggaaaattgtgtgtgtgtcttgcacaacctgagcttccagctggagagtgaagcccct
gccctcttcagcaggatcactgccctggccaggacacccagcagggccaacacccccagt
gagaccggccccattgggtgcttcagcccacagagcagcaaggtccaggagcaggagagt
cactttgactaccctgtgatggaggagcagaaccctaaaggagcaggctggctcttccac
tccaagaccatgcagagttacttgtctctgctggggtccagccagagagaagagaccctg
gaggcctgctctggagccctgcagaacctcactgctaaccaaggcattgtgtctagtgtg
atgagccagagcatcgtgcagaagctgaacggcctgcctcacatctctcccctgctgcaa
tcctccaaccccagcctccagaaaactgctgtgtctctggtagggaacctggccaagaac
caacgccttcagagcaccatggcccgacagaccctaccggagctagttggcatcctcagc
tcatggaccaagaaagagacagagtttgattacaccctggccatggcgtgccaaaccagc
cacagtctgctaatgaaggagcctgagctggggaaacccctgctgaccaacaagctggtc
aactcagttaacgacctgagcaagaacaggggtttcccaaaggccagcaaagctgcaggt
gtgctcctctacagcctctggtcagagaaggacgtacagagtttcctaaaaaagcaaggg
atgaataagggttcctttgtgaatgacatcaccagcgcggctcaccggtctgtgcaggtc
attgagtaa
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