Salvelinus namaycush (lake trout): 120066407
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Entry
120066407 CDS
T07522
Name
(RefSeq) bile acid receptor-like isoform X1
KO
K08537
farnesoid X receptor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120066407
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120066407
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120066407
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
120066407
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120066407
NCBI-ProteinID:
XP_038873682
UniProt:
A0A8U1FCZ8
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Position
Sna21:complement(45112498..45148023)
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AA seq
491 aa
AA seq
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MNEWVGHDVNVVGLLQIPPNDGFPLSESSHFFDILSEQGSPLLQHQEVLTFTSYPSMQYP
SVEPTMSSPPYYSSQNYYPQYNSDEWYSPTGMYELRKGPLEGTYNAEMEEASTIVPAVCN
RTRHTSHTGSVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKKAVYKCKNGGTCE
MDMYMRRKCQECRLRKCKEMGMLAECEYQAECLLTEIQCKSKRLRKNPKVSPGQSTGDET
EGGDNGDTKQVTSTTKLSKEKLELSQEQQALLSFIVEAYQKHRIPQDMAKKLLQEQFNAE
ENFLLLTEMATSHVQVLVEFTKNIPGFSALDHEDQIALLKGSAVEAMFLRSAQVFTRKLP
HGHTEVLEDRIRKSGISEEFITPMFTFYKSIGELQMMQEEHALLTAITILSPDRPYVKGQ
QAVERLQEPMLEVLRRFCAMQHPLEPQHFARLLGRLTELRTLNHHHAEMLTSWRMSDHKF
TPLLCEIWDVQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggtgggccacgacgtcaatgtggtgggactactacagatccctcccaac
gatggattcccactgtctgagagctcacacttctttgatattctgtcagaacaaggtagc
cctctgctccagcaccaggaagtcttaaccttcaccagctatcccagcatgcaatacccc
tcggtggagcccaccatgtcctccccgccatactactccagtcagaactactacccccag
tacaacagcgatgagtggtactcacccacagggatgtatgaactgaggaaaggaccccta
gagggcacttataatgctgaaatggaagaggcgtccaccatagtgcctgcggtgtgcaat
aggacccggcacacatcccacacaggcagtgtcaaaggggaggagctgtgtgtggtgtgt
ggggacaaggcatccgggtatcactataatgctctcacctgtgaggggtgtaaaggcttc
ttcaggcggagcatcaccaagaaagctgtgtacaagtgcaagaatggagggacctgtgag
atggacatgtacatgcggaggaagtgccaggagtgtcgtctccggaagtgcaaagagatg
ggcatgctggcagagtgtgagtatcaggcagagtgtctgctgacagagatccagtgtaaa
tctaaaaggctgaggaaaaaccccaaggtctcaccaggacagtccaccggggacgagaca
gaggggggagacaacggagacaccaaacaggtcacctccaccaccaaactgtcgaaggag
aagcttgaactcagtcaagagcaacaggctctcttgagcttcatcgtagaagcttatcag
aaacatcgaattcctcaagacatggccaaaaaactgctacaagagcagttcaatgcagaa
gagaacttccttcttttgacagagatggccaccagtcatgttcaagtgctggtggagttt
accaaaaacattccaggtttctcagccctggaccatgaggatcagatagcactgttgaag
ggctcggcagtggaggccatgttcctgcgctcagcacaggtgtttaccaggaagctaccc
catggacacacagaggtgttggaggacaggatacgcaagagtggcatatcagaggagttt
attacacccatgttcaccttctataaaagcatcggggaactccagatgatgcaggaagaa
cacgccctcctcaccgccattaccatcctgtcaccagaccggccgtacgtgaagggccag
caggcggtggagaggctgcaggagcccatgttggaggtgctcaggaggttctgtgccatg
cagcacccgctggagccccagcactttgcccgtctcctgggccgtctgactgagctgcgg
acactcaaccaccaccatgctgagatgctcacctcctggcgcatgagcgaccacaagttc
acacccctcctctgcgagatctgggacgtacagtaa
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