Salvelinus namaycush (lake trout): 120066621
Help
Entry
120066621 CDS
T07522
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120066621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snh03400
]
120066621
Enzymes [BR:
snh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
120066621
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120066621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
120066621
NCBI-ProteinID:
XP_038873974
UniProt:
A0A8U1H7P8
LinkDB
All DBs
Position
Sna21:12503399..12512260
Genome browser
AA seq
339 aa
AA seq
DB search
MAHMVVSHELMAQQEPANIAKAPAKKRGRTAQPKEPKMPKAKPGPKAKPGPKAKPGPKPK
KGKEGQEADGTQEKIDKTFKKVKKKRDRFKGMTEDEVMSRTLTDILDYNLDYVIIGINPG
LVAAYVGRWFPGHGNHFWKCLFLSGFTDEQLNHMSDTSLPEKYKIGFTNMVARTTPGSKD
LSTKELREGALILAEKLKKYKPLIAVFNGKCIYEMFCREMFGKKPKKLDFGLQPHKIPDC
EVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRNQLRGVARSDEIQELEYSFDLGLAKE
DAKRMAIKEEAYDPGYEAAFGGAYGEGGPGPEEGQSNGH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggctcatatggttgtcagtcatgagctcatggctcagcaagagcccgccaacatagcg
aaagctccagcaaaaaagcgagggagaacggcacaaccaaaggaacccaagatgcccaag
gccaaaccgggacccaaggccaaaccgggacccaaggccaaaccgggacccaagcccaag
aaaggtaaggagggtcaagaggcagacggcacgcaggagaaaatagacaagaccttcaag
aaggtcaagaagaaaagggaccgcttcaagggcatgactgaggatgaggtcatgagtaga
actctgaccgacatccttgactacaacctggactatgttatcattggaatcaacccaggt
ctcgtggcagcctatgttggacgatggttccctggccatggaaaccatttctggaagtgc
ctgttcttgtccggattcactgatgagcagcttaaccacatgagcgacaccagcctgcca
gagaaatataagatcggcttcaccaacatggtggcaaggacaacgcctggaagcaaggac
ctgtcaaccaaggagttacgcgagggcgccttaattcttgctgagaagttgaaaaagtac
aagcccctcatagctgttttcaatggaaaatgtatctatgaaatgttctgcagagagatg
tttggtaaaaagcccaagaagcttgactttggtctgcagccacacaagataccggactgt
gaagtggcgttgtatctgatgccctcatcaagtgcccgctgtgcccagtttccccgtgcc
caggacaaagtgcacttctacatcaagctgagggaattgaggaaccagctcaggggcgtg
gcccgatctgacgagattcaggagttggagtacagctttgacctgggactggccaaagag
gacgctaagaggatggcgatcaaggaagaggcgtacgacccaggctacgaggccgccttc
ggcggagcgtatggcgagggcgggcccgggcctgaggagggtcagagcaacggtcactaa
DBGET
integrated database retrieval system
