Sphingomonas nostoxanthinifaciens: K8P63_16990
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Entry
K8P63_16990 CDS
T08862
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos01501
beta-Lactam resistance
snos01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K8P63_16990
01503 Cationic antimicrobial peptide (CAMP) resistance
K8P63_16990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snos02000
]
K8P63_16990
01504 Antimicrobial resistance genes [BR:
snos01504
]
K8P63_16990
Transporters [BR:
snos02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K8P63_16990
Antimicrobial resistance genes [BR:
snos01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K8P63_16990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UAK24027
LinkDB
All DBs
Position
complement(3603438..3606602)
Genome browser
AA seq
1054 aa
AA seq
DB search
MSRFFINRPIFAFVIAIVLMLLGTIAITQLPISQYPAIAPPTIAINATYPGADAQTLENT
TTQIIEQQLKGIDNLRYFSSNSSSAGTVTITLTFEQGTNADIAQVQVQNKLQAATPLLPQ
EVQQQGIRVVKATQNFLIFVGLYSDNPKLHDSDDLSDFVVSKIQDPVSRINGVGDTQVFG
SQYAMRIWVDPLKLQTYGLTMTDVSSAVTAQNAQVSAGQLGQAPAPATQMLNATVTVASR
LQTADEFGAIRLKSNADGSVVRIRDVARVHIGAETFGFEGKWNGLPASGIAIKPAAGANA
LDTVALVKARVNEIAKQFPPDVHVIYPYDTTPFVRLSIRQVVETLLEAVVLVFLVMFLFL
QNWRATLIPTIAVPVVLLGTFAVLKIAGYSINVLTLFGMVLAIGLLVDDAIVVVENVERL
IVTEHLSPREAARKSMDEITGALVGIALVLSAVFLPMAFFGGSTGVIYRQFSITIVSAMA
LSVMVALILTPALCATILKPHDPTKHEGNGLLARFFNGFNYYFDRGQEKYERGVRSTASR
WGRSLLAYALIVAGMVFLFTRLPTGFLPDEDQGVAIALAQLPAGATKARTDAALATARDH
FLKTEAGNIQGVYTISGFSFSGQGQNAGIIFIPLKRWEERPGAKNRAQAIVGRAMGVFSQ
WHDGMIFALIPPAVQELGNATGFDMQLVDETGIGHQKLRAARNQLLGMAASDPRVAGVRP
NDLDDAPQLKIDVDQDKASALGLSIADVHSTISTAWGGSYINDFIDRGRVKRVYVQADEP
YRMKPEDLADFYVRGTNGKMAPYSAFSSLSWSNAPVALTRYNGQPAMEILGTPAPGQSSG
TALRAMEEMQAKLPAGTSLSWTGLSYEEQLSGGQAPSLYALSLVIVFLCLAALYESWSVP
IAVMLVVPLGVVGALFAAWITGLNNDIYLQVGLITTIGVSAKNAILIVEFAEERMQEDGM
TTFDAAIQAAKLRLRPILMTSLAFVFGVFPLAIATGAGAGGQNAIGRAVVGGMLSATMFA
IFFVPMFFVVVGRLFGHDKKRAATPDGQMAEQGA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcttcttcatcaatcggccgatcttcgccttcgtcatcgccatcgtgctgatg
ctgctcggcacgatcgcgatcacgcagctgccgatctcgcaatatccggcgatcgcgccg
ccgacgatcgcgatcaacgcgacctatccgggcgccgacgcgcagacgcttgaaaacacg
acgacccagatcatcgagcagcagctgaagggcatcgataaccttcgctacttctcgtcg
aattccagctcggccggaacggtcacgatcacgctgacgtttgagcagggcacgaatgcc
gacatcgcccaggtgcaggtgcagaacaagctgcaggcggcgaccccgctcctgccgcag
gaggtgcagcagcagggcatccgcgtcgtcaaggcgacgcagaacttcctgatcttcgtc
ggcctctattccgacaatccgaagctgcacgacagtgacgacctgagcgacttcgtcgtc
tcgaagatccaggatccggtcagccgcatcaacggcgtgggcgatacccaggtcttcggc
agccaatatgcgatgcgcatctgggtcgatcccctgaagctgcagacctacggcctgacg
atgaccgacgtgtcatcggcggtgaccgcgcagaacgcccaggtctccgccgggcagttg
ggccaggcgccggcgccggccacgcagatgctgaacgcgaccgtgaccgtcgcgtcgcga
ctgcagaccgccgacgagttcggcgcgatccggctcaagtccaatgccgacggatcggtg
gtgcgcatccgcgacgtggcgcgcgtccatatcggcgcggagacgttcggcttcgagggc
aagtggaacggcctgccggcctccggcatcgcgatcaagcccgccgccggcgccaacgcg
ctcgataccgtcgcgctcgtgaaggcgcgcgtcaacgagatcgccaagcagtttccgccc
gacgtccacgtaatctacccgtacgacacgacgccgttcgtgcggctgtcgatccgtcag
gtcgtggagacgctgctcgaggcggtcgtgctggtcttcctcgtcatgttcctgttcctg
cagaactggcgggcgaccctgatcccgacgatcgcggtgccggtggtgctgctcggcacc
ttcgcggtgctcaagatcgccggctattcgatcaacgtgctgaccttgttcggcatggtg
ctggcgatcggcctgctcgtcgacgacgccatcgtcgtcgtcgagaatgtcgagcgactg
atcgtcaccgaacatctctcgccgcgcgaggcggcgcgaaaatcgatggacgagattacc
ggcgcgctcgtcggtatcgcgctcgtcctgtcggcggtgttcctgccgatggccttcttc
ggcggatcgaccggcgtcatctatcgacaattctcgatcaccatcgtctccgcgatggcg
ctgtcggtgatggtcgcgctgatcctgacgcccgcgctgtgcgcgaccatcctgaagccg
cacgacccgacgaagcacgagggcaacgggctgctcgcgcgcttcttcaacggcttcaat
tattatttcgaccgcggccaggagaagtatgagcgcggcgtgcgctcgaccgcctcgcgc
tgggggcgctcgctgctcgcttatgcgctgatcgtcgccggcatggtcttcctgttcacg
cgcttgccgaccggcttcctgcccgacgaggatcagggcgtcgcgatcgcgctcgcccag
ctgcccgcgggcgccaccaaggcgcgcaccgatgcggcgctggccacggcccgcgaccat
ttcctgaagaccgaagccggcaacatccagggcgtctacacgatcagcggcttctccttt
tccggccagggccagaatgccggcatcatcttcatcccgctcaagcggtgggaggagcgc
cccggcgccaagaaccgcgcgcaggcgatcgtcggccgcgcgatgggcgtgttcagccag
tggcatgacggcatgatcttcgcgctgatcccgccggccgtccaggaactgggcaacgcg
accggcttcgacatgcagctcgtcgacgagaccgggatcggccaccagaagctgcgcgcc
gcgcgcaatcagttgctcggcatggccgcgtccgatccgcgcgtcgcgggcgtgcggccc
aacgatctcgacgatgcgccgcagctgaagatcgatgtcgaccaggacaaggcctccgcg
ctcggcctgtcgatcgccgacgtgcacagcacgatctcgaccgcgtggggcggcagctac
atcaacgacttcatcgatcgcggccgcgtgaagcgcgtctacgtccaggccgacgaaccc
tatcgcatgaagcccgaagacctcgccgacttctacgtgcgcggcacgaacggaaagatg
gcgccgtattcggccttttcgagcctgagctggtcgaacgcgccggtcgcgctgacccgc
tataacggccagcccgcgatggagattctcggcacgcctgcgcccggccagagctcgggc
acggcgctccgggcgatggaggagatgcaggccaagctgccggcggggaccagcctgagc
tggaccggcctgtcgtacgaagagcagttgtcgggcggtcaggcgccgtcgctctacgcg
ctgtcgctggtcatcgtgttcctgtgtctcgcggcgctctacgagagctggtcggtgccg
atcgcggtcatgctcgtcgtgccgctgggtgtcgtcggcgccttgttcgcggcgtggatc
accgggctcaacaacgacatctacctgcaggtgggcctcatcacgaccatcggcgtctcg
gccaagaatgccatcctgatcgtcgagttcgccgaggagcggatgcaggaggacggcatg
acgaccttcgatgcggcgatccaggcggccaagctgcgcctgcgcccgatcctgatgacc
agcctcgccttcgtgttcggcgtctttccgctcgcgatcgccaccggggcgggcgcgggc
ggccagaatgcgatcggtcgcgcggtggtcggcggcatgctctcggcgacgatgttcgcg
atcttcttcgtgccgatgttcttcgtggtggtcggccgcctgttcggccacgacaagaag
cgggctgcgacgccggacggccagatggcggagcagggcgcatga
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