Streptococcus pneumoniae AP200 (serotype 11A): SPAP_1076
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Entry
SPAP_1076 CDS
T01309
Name
(GenBank) NAD-dependent DNA ligase (contains BRCT domain type II)
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
snp
Streptococcus pneumoniae AP200 (serotype 11A)
Pathway
snp03030
DNA replication
snp03410
Base excision repair
snp03420
Nucleotide excision repair
snp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPAP_1076
03410 Base excision repair
SPAP_1076
03420 Nucleotide excision repair
SPAP_1076
03430 Mismatch repair
SPAP_1076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snp03032
]
SPAP_1076
03400 DNA repair and recombination proteins [BR:
snp03400
]
SPAP_1076
Enzymes [BR:
snp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SPAP_1076
DNA replication proteins [BR:
snp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SPAP_1076
DNA repair and recombination proteins [BR:
snp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SPAP_1076
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPAP_1076
MMR (mismatch excision repair)
DNA ligase
SPAP_1076
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SPAP_1076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ADM84665
LinkDB
All DBs
Position
complement(1029302..1031248)
Genome browser
AA seq
648 aa
AA seq
DB search
MNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVGGKVL
DGFEKYSHQYPLYSLQDAFSREELDAFDARVRKEVAHPTYICELKIDGLSISLTYEKGIL
VAGVTRGDGSIGENITENLKRVKDIPLTLPEELDITVRGECYMPRASFDQVNQVRQENGE
PEFANPRNAAAGTLRQLDTAVVAKRNLATFLYQEASPSTRDSQEKGLKYLEQLGFVVNPK
RILAENIDEIWNFIQEVGQERENLPYDIDGVVIKVNDLASQEELGFTVKAPKWAVAYKFP
AEEKEAQLLSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRKDDTVI
VYKAGDIIPAVLRVVESKRVSEEKLDIPTNCPSCNSDLLHFEDEVALRCINPRCPAQIME
GLIHFASRDAMNITGLGPSIVEKLFAANLVKDVADIYRLQEEDFLLLEGVKEKSAAKLYQ
AIQASKENSAEKLLFGLGIRHVGSKASQLLLQYFHSIENLYQADSEEVASIESLGGVIAK
SLQTYFATEGSEILLRELKETGVNLDYKGQTVVADAALSGLTVVLTGKLERLKRSEAKSK
LESLGAKVTGSVSKKTDLVVVGADAGSKLQKAQELGIQVRDEAWLESL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagttagtcgctttgctcaatcgctatgcgactgagtactataccagcgataat
ccctcggtttcagacagtgagtatgaccgcctttaccgtgagttggtcgagttagaaact
gcttatccagagcaagtgctagcagacagtccgactcatcgtgttggtggcaaggtttta
gatggttttgaaaaatacagtcatcagtatcctctttatagtttgcaggatgctttttca
cgtgaggagctagatgcttttgatgcgcgtgttcgtaaggaagtggctcatccgacctat
atttgtgagctgaaaatcgatggcttatctatctcgctgacttatgaaaaggggattttg
gttgctggggtaacacgtggagatggttcaattggtgaaaatatcacagaaaacctcaag
cgtgttaaggacatccctttgactttgccagaagaactagatatcacagttcgtggggaa
tgttacatgccacgcgcttcctttgaccaagttaaccaagtgcgccaagaaaatggagag
cctgaatttgctaatcctcgtaatgcggcagcaggaactctgcgtcagttggatacagca
gtagttgccaagcgtaatcttgcaacgtttctctatcaagaagccagcccttcaactcgt
gatagccaagaaaagggtttgaagtacctagaacaactaggttttgtggtcaatcctaag
cgaatcttggctgaaaacatagatgaaatctggaattttatccaagaagtaggacaggaa
cgggaaaatctgccttacgatattgatggagtggtaatcaaggtcaacgacctagcaagt
caagaagaacttggttttaccgttaaggctccaaagtgggcagtagcctacaagttccct
gctgaagaaaaagaagctcaactcttatcagttgactggacagttggccgtaccggtgtt
gtaactccaactgctaatctaacaccagtacaacttgccggtacgactgttagccgtgcg
accctgcacaatgtagattatattgctgaaaaagatatccgaaaagacgatacggtcatt
gtatataaggctggtgacatcatccctgccgttttacgtgtggtagagtccaaacgggtt
tctgaagaaaaactagatatccctacaaactgtccaagttgtaactctgacttgttgcac
tttgaagatgaagtggccctacgttgtatcaatccgcgttgccctgctcaaatcatggaa
ggcttgattcactttgcttctcgtgatgctatgaatattacaggccttggtccatctatt
gttgagaagctttttgctgctaatttagtcaaggatgtggcggatatttatcgtttgcaa
gaagaggatttcctccttttagagggggttaaggaaaagtccgctgctaaactgtatcag
gctatccaagcatcaaaggaaaattctgccgagaagctcttatttggtttgggaattcgt
catgtcggaagcaaggctagtcagcttttacttcaatatttccattcaattgaaaatctg
tatcaggcagattcagaggaagtggctagtattgaaagtctaggtggcgtgattgccaaa
agtcttcagacttattttgcgacagaaggctctgaaattctgctcagagaattgaaagaa
actggggtcaatctggactataaaggacagacggtagtagcggatgcggccttgtcaggt
ttgaccgtggtattgacaggaaaattggaacgactcaagcgctcagaagctaaaagtaaa
ctcgaaagtctgggtgccaaagtgacaggtagtgtttctaaaaagaccgacctcgtcgtg
gtaggtgcagacgctggaagtaaactgcaaaaagcacaagaacttggtatccaggtcaga
gatgaggcatggctagaaagtttgtaa
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