KEGG   Streptomyces niveus: BBN63_09265
Entry
BBN63_09265       CDS       T04887                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
snw  Streptomyces niveus
Pathway
snw03030  DNA replication
snw03410  Base excision repair
snw03420  Nucleotide excision repair
snw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:snw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BBN63_09265
   03410 Base excision repair
    BBN63_09265
   03420 Nucleotide excision repair
    BBN63_09265
   03430 Mismatch repair
    BBN63_09265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:snw03032]
    BBN63_09265
   03400 DNA repair and recombination proteins [BR:snw03400]
    BBN63_09265
Enzymes [BR:snw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BBN63_09265
DNA replication proteins [BR:snw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BBN63_09265
DNA repair and recombination proteins [BR:snw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BBN63_09265
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBN63_09265
   MMR (mismatch excision repair)
    DNA ligase
     BBN63_09265
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BBN63_09265
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 HHH Nlig-Ia Zn_ribbon_6
Other DBs
NCBI-ProteinID: AQU70775
UniProt: A0A1U9R4E0
LinkDB
Position
complement(2226371..2228635)
AA seq 754 aa
MAGEQQTAVPAEARERHAHLAEQVEEHRFRYYVKDQPVVSDGEFDKLLRALEALEERYAE
LRTPDSPTQKVAGAYETEFTAVEHRERMLSLDNAFDDEELAAWAERVARDVGAPGYHFLC
ELKVDGLAVNLTYEQGRLTRAATRGDGYTGEDITPNVRTIAEIPHRLTGDRVPELVEIRG
EVFFPMDGFQELNARLVAAGDKPFANPRNAAAGSLRQKDPKVTASRPLHMVVHGIGAREG
FDIDCLSHAYGLLEEWGLPTAQHNKVVEDLAGVREFISHFGENRHSVQHEIDGVVVKLDE
ISLQGRLGSTSRAPRWAIAWKYAPEEVNTKLVDIRVGVGRTGRVTPYAVVEPVHVAGSEV
EFATLHNQEVVKAKGVLIGDTVVLRKAGDVIPEILGPVADLRDGSEREFEMPAVCPDCGT
ELQAMKEGDIDLRCPNARSCPAQLRERLFYLGGRKCLDIENFGYVAAAALTKPLEPSTPP
LLNEGDLFTLTVDQLLPIKAYVLDSDSGLPKRDPETGEEKVVTVFANQEGQPKKNALAML
EHIEAAKERPLARIIAGLSIRHVGPVASVALAREFRSIDRIERATEEELAAVEGVGPTIA
ASLKQWFEVDWHREILRKWREAGVRMEEEGGGEDEGPRPLAGLTVVVTGTLENHTRDGAK
EALQTLGAKVTGAVSKKTAFVVVGENPGSKFDKAMQLKVPVLDETGFAVLLAEGPEAARE
AAVQAPGAPEDSAPEPAKDVPRTADDASAGSGTD
NT seq 2265 nt   +upstreamnt  +downstreamnt
gtggccggcgaacagcagacggcagtgcccgcggaagcgcgggagcgacacgcgcacctc
gccgagcaggtcgaggagcaccggttccgctactacgtgaaggaccagccggtcgtcagc
gacggcgagttcgacaagctgctgcgcgccctcgaggcgctggaggagcggtacgcggag
ctgcgtacgcccgactcgccgacccagaaggtcgcgggggcgtacgagacggagttcacc
gcggtcgagcaccgcgagcgcatgctctcgctggacaacgcgttcgacgacgaggagctg
gcggcctgggcggagcgcgtcgcccgcgacgtgggcgcgccgggttatcacttcctgtgc
gagctgaaggtggacggactcgccgtcaatctgacgtacgaacaggggaggctgacgcgc
gccgccacccgcggggacggctacaccggcgaggacatcacgcccaacgtccgtacgatc
gccgagatcccgcaccggctgacgggcgaccgcgtcccggagctggtcgagatccgcggc
gaggtcttcttcccgatggacggcttccaggagctcaacgcccggctggtggcggccggt
gacaagccgttcgccaacccgcgcaacgcggcggcgggttcgctgcgccagaaggacccg
aaggtcacggcgtcgcgcccgctgcacatggtggtgcacggcatcggggcacgcgagggc
ttcgacatcgactgcctgtcgcacgcctacggactgctggaggagtggggtctgccgacg
gcccagcacaacaaggtggtcgaagacctcgcgggggtgcgggagttcatctcccacttc
ggggagaaccgccactccgtgcagcacgagatcgacggcgtcgtggtcaagctggacgag
atctcccttcagggcaggctcggttcgacctcccgtgccccgcgctgggcgatcgcttgg
aagtacgcgccggaggaggtcaacaccaaactggtcgacatccgggtcggtgtgggacgc
accggccgggtcactccctacgcggtggtcgagccggtccatgtcgcgggctccgaggtc
gagttcgccaccctccacaaccaggaggtggtgaaggccaagggcgtcctcatcggtgac
acggtcgtgctgcgcaaggcgggcgacgtcatcccggagatcctgggcccggtcgccgat
ctgcgggacggcagcgagcgcgagttcgagatgccggccgtctgccccgactgcggtacg
gaattgcaggccatgaaggagggcgatatcgacctccgctgccccaacgcccgctcctgc
cccgcccagttgcgcgagcggttgttctatctcggtggccgcaaatgcctggacatcgag
aacttcggctatgtcgccgctgccgcgctgaccaagccgctggagccttcgacgcccccg
ctgctcaacgagggtgacctcttcacgctcaccgtggaccagttgctgcccatcaaggcg
tatgtgctcgactcggacagcggcctgcccaagcgcgacccggagaccggcgaggagaag
gttgtcaccgtcttcgccaaccaggagggccagccgaagaagaacgcgctggcgatgctg
gagcacatcgaggccgccaaggaacgcccgctggcccggatcatcgcggggctgtccatc
cggcacgtgggaccggtcgcctcggtcgcgctggccagggagttccggtccatcgacagg
atcgagcgggccaccgaggaggagctggcggccgtcgagggcgtcggcccgaccatcgcg
gcctcgctcaagcagtggttcgaggtggactggcaccgcgagatcctgcgcaagtggcgt
gaggccggggtccggatggaggaggagggcggcggcgaggacgagggtccgcgcccgctc
gcgggtctcaccgtcgttgtcacgggcacgttggaaaatcacaccagggatggcgcgaaa
gaggcgctccagacgctcggagcgaaagtcaccggcgccgtgtcgaagaagaccgccttc
gtggtggtaggtgagaaccccggctccaagttcgacaaggcgatgcagctgaaggtgccg
gtgctcgacgagacgggcttcgccgtcctgctcgccgaaggccccgaagcggcgcgagag
gccgcggtacaggcgccaggggcccctgaggacagtgcgccggaaccggccaaggacgtc
ccccggacggctgacgatgcgtctgccgggagcgggaccgactga

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