Streptomyces nigra: DC008_08815
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Entry
DC008_08815 CDS
T05839
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
snz
Streptomyces nigra
Pathway
snz00300
Lysine biosynthesis
snz00550
Peptidoglycan biosynthesis
snz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DC008_08815
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DC008_08815
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snz01011
]
DC008_08815
Enzymes [BR:
snz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DC008_08815
Peptidoglycan biosynthesis and degradation proteins [BR:
snz01011
]
Precursor biosynthesis
Amino acid ligase
DC008_08815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF7302
Motif
Other DBs
NCBI-ProteinID:
AWE49816
UniProt:
A0ABZ1IVH1
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All DBs
Position
complement(1899114..1900643)
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AA seq
509 aa
AA seq
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MTYPGPPRPVQVAATPLAELADQLGAATPAQPDGAVEVTGITHDSRAVRPGDLYAALPGA
RLHGADFVTQAAGLGAVAVLTDPTGAERAAATGLPVLVADDPRGRMGELAATIYGHPGRD
LLQIGITGTSGKTTTAYLVEGGLRTARSTGLIGTVEMRIGDERIKSERTTPEATDLQALF
AVMRERGVEAVAMEVSSHALVLGRVDGCVFDIAVFTNLSPEHMEFHSDMEDYFQAKAQLF
TPARSRLGVVNVDDEYGRRLVKEAGVPVVTFSAEGHPDADWRAEDVRIGPMDARFTVIGP
KDERITATSPLAGPFNVANTLAAIVALAAAGLDPQTAADGIAAVPGVPGRLERVDAGQPY
LAVVDYAHKTDAVESVLKALRKVTEGKVHVVLGCGGDRDRTKREPMGAAAARLADTAVLT
SDNPRSEDPLAILAAMLRGAASVPAHERGEVQVFEDRAAAIAAAVARAQPGDTVLIAGKG
HEQGQDIAGVVRPFDDRQVLREAIKKTQG
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtatccgggaccgcccaggccggtacaggtcgccgccacacccctggcggaactc
gccgatcagctgggtgccgccacgccggcacagccggacggcgccgtcgaggtcacgggc
atcacccatgactcgcgggccgtccgccccggcgatctgtacgccgccctcccgggcgcc
cgcctgcacggcgccgacttcgtgacccaggccgccggcctcggcgcggtcgccgtgctc
accgacccgaccggcgccgagcgcgccgccgcgaccggcctgccggtcctggtggccgac
gacccgcgcggccggatgggcgaactcgcggccaccatctacggccacccgggccgcgac
ctgctccagatcggcatcaccggcacctccggcaagaccaccaccgcctacctcgtcgag
ggcggcctgcgcacggcccgctccaccggcctgatcggcacggtcgagatgcgcatcggc
gacgagcggatcaagtccgagcgcaccacccccgaggccaccgacctgcaggccctgttc
gccgtcatgcgcgagcgcggcgtcgaggcggtcgccatggaggtctccagtcacgccctg
gtgctcgggcgggtcgacggctgtgtcttcgacatcgccgtcttcaccaacctgagcccg
gagcacatggagttccactccgacatggaggactacttccaggccaaggcacagctgttc
accccggcgcgcagccggctcggcgtggtcaacgtcgacgacgagtacggccgccggctc
gtgaaggaggccggcgtcccggtcgtcaccttctccgccgagggccacccggacgccgac
tggcgggccgaggacgtccgcatcggccccatggacgcccggttcacggtgatcggcccc
aaggacgagcggatcaccgccacctcgccgctggccggtcccttcaacgtggccaacacc
ctcgccgcgatcgtcgccctggccgccgcgggtctcgacccgcagaccgccgccgacggc
atcgccgccgtaccgggcgtgccgggccggctcgagcgggtggacgccgggcagccgtac
ctcgcggtcgtggactacgcccacaagaccgacgccgtcgagtccgtcctgaaggccctg
cgcaaggtcaccgagggcaaggtgcacgtggtgctcggctgcggcggcgaccgggacagg
acgaaacgggagccgatgggcgctgccgcggcgcggctcgccgacaccgccgtcctgacc
tccgacaacccccgctccgaggaccccctcgcgatcctcgcggccatgctccggggtgct
gcctccgtgccggcgcacgagcgcggcgaggtgcaggtcttcgaggaccgggccgccgcg
atcgccgccgccgtcgcccgcgcccagcccggggacaccgtgctgatcgcgggcaagggc
cacgagcagggccaggacatcgccggggtggtccgtcccttcgacgaccgccaggtgctg
cgcgaagccatcaagaagacccagggatga
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