Streptomyces nigra: DC008_19065
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Entry
DC008_19065 CDS
T05839
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
snz
Streptomyces nigra
Pathway
snz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DC008_19065 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snz03400
]
DC008_19065 (nth)
Enzymes [BR:
snz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DC008_19065 (nth)
DNA repair and recombination proteins [BR:
snz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DC008_19065 (nth)
Prokaryotic type
DC008_19065 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AWE51582
UniProt:
A0A2S1IGP8
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All DBs
Position
4103672..4104535
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AA seq
287 aa
AA seq
DB search
MGEQGPGGGKRAARAAEKAPGEAAASKLAVGQSRTALVRRARRINRELAEVYPYAHPELD
FENPFQLLVATVLSAQTTDLRVNQTTPALFAKYPGPEDLAAANPEEVEEILRPCGFFRAK
TRSVMGLSKALVEDYGGEVPGRLEELVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLV
RRWQWTEQTDPDKIEAEVGALFPKREWTDLSHHVIWHGRRICHARKPACGACPIAPLCPA
YGEGETDPEKARKLLKYEKGGFPGQRLKPPQSYLDAGGKPAPPLGAA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgaacagggtcccggtgggggcaagagggcggcgcgggcggctgaaaaggcgccg
ggcgaggccgccgcgtcgaagcttgccgtggggcagtcgcggaccgccctggtgcggcgg
gctcggcggatcaatcgggagcttgccgaggtgtatccgtacgcccatcccgagctggac
ttcgagaatccgttccagctgctggtcgcgactgttctgagtgctcagaccactgatctg
cgggtgaaccagacgacgcctgctctgttcgcgaagtatccggggcctgaggatctggcc
gccgccaatccggaggaggtcgaggagatcctgcggccctgcgggttcttccgggccaag
acccggtcggtgatggggctgtccaaggcgctcgtggaggactacggcggggaggtcccc
gggcggttggaggagctggtcaagctaccgggtgtggggcggaagacggcttttgtggtg
ttgggtaatgccttcgggcggcctgggatcactgtcgacactcattttcagcggctggtc
cggcggtggcagtggaccgagcagaccgacccggacaagatcgaggcggaggtcggggcg
ctgttcccgaagagggagtggaccgatctttcgcaccatgtgatctggcacgggcggcgt
atttgtcatgcgcggaagcctgcttgtggtgcatgtcccatcgccccgttgtgtcctgcc
tacggtgaaggtgagacggatcccgagaaggcgcggaagctgctgaagtacgagaagggt
ggcttccccgggcagcgtctgaagccgccgcagtcctatctggacgcggggggcaagccg
gccccgccgttgggggccgcgtga
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