Solenopsis invicta (red fire ant): 105195164
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Entry
105195164 CDS
T03916
Name
(RefSeq) RING-box protein 1A
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03420
Nucleotide excision repair
soc04120
Ubiquitin mediated proteolysis
soc04141
Protein processing in endoplasmic reticulum
soc04310
Wnt signaling pathway
soc04341
Hedgehog signaling pathway - fly
soc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105195164
04120 Ubiquitin mediated proteolysis
105195164
09124 Replication and repair
03420 Nucleotide excision repair
105195164
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105195164
04341 Hedgehog signaling pathway - fly
105195164
04350 TGF-beta signaling pathway
105195164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soc04121
]
105195164
03400 DNA repair and recombination proteins [BR:
soc03400
]
105195164
Enzymes [BR:
soc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
105195164
Ubiquitin system [BR:
soc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
105195164
Multi subunit type E3
SCF complex
Ring finger protein
105195164
Cul2 complex
105195164
Cul3 complex
105195164
Cul4 complex
105195164
Cul7 complex
105195164
Cul8 complex
105195164
Cul9 complex
105195164
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105195164
TCR (transcription coupled repair) factors
Cul4-CSA complex
105195164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
105195164
NCBI-ProteinID:
XP_011158745
LinkDB
All DBs
Position
5:21936580..21938791
Genome browser
AA seq
113 aa
AA seq
DB search
MATTMEIDDDECDLPTSSSGKGEKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaccatggagatcgacgatgacgagtgcgatctgccaacctccagcagcggg
aaaggtgagaagaagcgtttcgaggtgaagaagtggaacgcagtggcactatgggcctgg
gatattgttgtggacaattgcgctatttgtcgtaatcatatcatggatctctgcattgag
tgtcaagcgaaccaggcgtctgctaccagtgaggaatgcacagtagcctggggtgtatgt
aatcacgcctttcactttcactgtatctcacgttggctgaaaactcgacaagtctgtcca
cttgataatcgtgaatgggaatttcagaaatatggccattaa
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