Solenopsis invicta (red fire ant): 105196583
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Entry
105196583 CDS
T03916
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105196583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soc03041
]
105196583
Spliceosome [BR:
soc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105196583
Complex C
U5 SnRNP specific factors
105196583
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
MMR_HSR1
Ras
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105196583
NCBI-ProteinID:
XP_011160902
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All DBs
Position
9:1330370..1340133
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AA seq
981 aa
AA seq
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MDADLYDEFGNYIGPDLASESEDENEYGNVGDDTDDRERSDEEMEEDKDESREQVEQGSS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRKAKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLVQQTHPYLHSITDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNIFDTPGHVNFSDEATAAIRLSDGAVLIVDAAE
GVMLNTERLLKHTIQEKLALTVCINKIDRLVLELKLPPLDAYYKLRHIIEEINGLISLYS
SDTENPGFVSPAIGNVCFASSEYSVCFTLKSFAALYARNYPGLNANEFAKRLWGDIYFNS
KTRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIRLTSEEMKMN
IRPLLRLVCTRFLGDMCGLVDMCVTHVPSPQVHAPIKVQHVYTGPIDSPLAQDMVNCDPD
GRLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLW
ISEARYSIELSRVPAGNWVLIEGIDRPIVKTSTITDLNNSEELHIFRPLKFNTQSVIKIA
VEPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEI
DIKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEQVRITWNK
KRLGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKTLLNSARDAIIQGFQ
WGTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPY
LFVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHT
QGQAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINK
FFDDPMLLELARQDVLLNYPL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgatttatatgatgaatttggaaattatatcggacctgatttggcatcggaa
agcgaggatgaaaacgaatacggtaatgttggcgatgataccgatgacagagaacgatct
gatgaagaaatggaagaagataaagatgagtcacgagagcaagtggaacaaggatcttct
atggcagttgtattacatgaagataagagatattatcccagtgcattagaagtgtatggg
cctgaggtggaaacacttgtgcaagaagaagatgcccaaccattagataaaccattaata
gcacctactagaaaagcaaagtttcaaataaaacaacaacaacttcctgaaaccacatat
agtattgaatttttagcagatatgatggatgcaccacatcttattagaaatgtggttttg
cttggacatcttcatcatgggaaaactactttggttgattgtttagtacaacaaacacat
ccttatttacatagtataacagatgaaaaaccattgagatatacagatacgttatttacc
gaacaacaaagaggcgtttccacaaaagctactcctgttactcttttgttacaagatgtt
aaatctaaatcatatcttttgaatatatttgatacaccgggccatgtgaatttctctgat
gaagcaacagctgcgatccgattgtctgatggtgcagtactgatcgttgatgcggcggag
ggtgtgatgctaaataccgaacgtctgctgaagcacacaattcaggaaaagcttgctctt
actgtttgcataaacaaaatagatcgtttggtattagagttaaaactacctcccttagac
gcttattacaaattgcggcatattatcgaagagattaatggactaatatcattgtactct
tcggatactgaaaatcctggctttgtttcacctgccattggaaatgtctgtttcgctagt
tccgaatacagtgtatgtttcactttgaaatcgtttgccgcgctttacgccagaaactat
cccggacttaatgccaacgagtttgctaaacgactctggggcgatatttattttaactct
aaaacgcggaagtttactaagaaaccaccccataataccgcgcaacgaagttttatcgag
tttatcctggagcccctgtataagatatttgcacaagtcgtcggtgatgtagacacaacg
ttaccagatgttctggatgaactcggtatacgattaacatctgaggaaatgaagatgaat
atacgaccgttgttaagacttgtgtgtacacgattcttaggagatatgtgtggcttagtg
gacatgtgtgttactcatgtgcctagcccgcaagtgcacgctcccattaaggtacagcat
gtctataccggcccgatagattcgccacttgcacaagacatggttaattgtgatcccgat
ggaagactaatgatccatagtacaaaaatgtatccaactgaggattgcactctatttgta
gttcttggcagagtaatgtccggtacattggaagcaggacaacgtgttcgcgtattaggt
gaagcgtattcacgtacagacgaggaggattcgcgcgttctcacggttggtagattgtgg
attagtgaggcacgttactcgattgagttgagtcgcgtacccgcaggcaattgggttctc
atagaaggtattgatcgaccaatcgtaaagactagcaccatcacagacctcaacaattcg
gaagaattgcatatatttcggccactcaaatttaacacgcagagtgttatcaaaattgcc
gtcgaaccagtcaatccatctgaattgccgaagatgttagatggtttgcgaaaagtaaac
aagagctatccgctgttgggtacacgagtggaggaaagcggcgagcatgttgtattaggt
accggcgaactttacctcgattgcgcgatgcatgatctgcgtcgtatgtattctgaaatc
gatataaaggtggccgatccagtggttgccttcgcggaaaccgtcgtagagaccagttcc
cttaaatgctttgccgaaacaccgaataaacgaaacaaattgaccatgatagcggaaccg
cttgagaggggtctcgctgaagacatagaagctgaacaagttcgtattacatggaacaaa
aaaagactcggagaatttttccaaacaaaatacgattgggatttattagcagcacgaagc
atatgggcatttggtccagactctacgggtcctaacattttagtggacgacactctgcct
tccgaagtagataaaacattgttgaacagcgctcgcgatgctatcatccaaggctttcaa
tggggaacacgtgaaggtccattgtgcgaggagccaattcgaaatgtcaagtttaaaatt
cttgatgcagttatcgcacaggagcccctacatagaggaggtggtcaaattattcctacc
gctcgacgtgttgcgtattctgctttcctcatggcaactccacgactgatggaaccgtac
ttgttcgttgaggtacaagcgcccgcggattgcgtatcagccgtttataccgttctagcg
aaacggcgaggtcacgtgacgcaggatgccccggttccgggcagtccgttgtacacgatt
aaggcttttataccagcgattgacagtttcggcttcgagactgatctacgaacacacact
caaggtcaagcattttgcctatccgtttttcatcattggcagattgtacctggagatcct
ctagataagagtattaccatcagaccgttggaaccgcagccagctacccatctagccaga
gaatttatgctgaaaacgcgaagacgcaagggattgtccgaggacgtgtccattaacaag
ttctttgatgatcctatgttactcgagttggcccggcaggatgtgttgctgaattatcct
ctttaa
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