Solenopsis invicta (red fire ant): 105198280
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Entry
105198280 CDS
T03916
Name
(RefSeq) TNF receptor-associated factor 6-A isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04013
MAPK signaling pathway - fly
soc04120
Ubiquitin mediated proteolysis
soc04140
Autophagy - animal
soc04144
Endocytosis
soc04214
Apoptosis - fly
soc04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105198280
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
105198280
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105198280
04140 Autophagy - animal
105198280
09143 Cell growth and death
04214 Apoptosis - fly
105198280
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105198280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soc04131
]
105198280
04121 Ubiquitin system [BR:
soc04121
]
105198280
Enzymes [BR:
soc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105198280
Membrane trafficking [BR:
soc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
105198280
Ubiquitin system [BR:
soc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
105198280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
U-box
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-Nse
zf-RING_6
zf-ANAPC11
Zn_Tnp_IS91
Sina_ZnF
Prok-RING_4
ASD2
TRAF3_RING
DZR_2
Motif
Other DBs
NCBI-GeneID:
105198280
NCBI-ProteinID:
XP_025988317
LinkDB
All DBs
Position
1:11259870..11266064
Genome browser
AA seq
353 aa
AA seq
DB search
METSSRSAEPTKVIEETENCDENIKGYVEPRFECPICLTWLRNPVLTSCGHKFCSQCIHT
WLKKKGACCPVDGQPLKSEDLFPDLYTSREISQKRTSCVYQQFGCEVKLSPVDMEMHITQ
CTYKQNLSEPQEKRTNAMSAESKLWDPPLKKGIQVADKEELSSDWQQLLKNLYERIVVLE
QENRELSITVSNQKNQLANMCLRNCNGVYIWRLKSFQEKLDTMINDPLKMFYSPGFYTSP
NGYKICARINISSKDPNYLSFVLHIMKSENDDALDWPFNGTMFFALIHPQDSEKNICDTT
SSQPDLEAFRKPTCELNKRSFGYTEFIRIRDITDFLQHDTLIFRIEVHPICLR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatcgagcagatcagcggagcctactaaggtcatcgaggaaactgaaaattgt
gacgaaaacatcaaaggctatgtagagcctagatttgaatgtcccatttgtctaacatgg
ttgcgcaatccagttttaacatcttgtggtcataagttttgttctcagtgcattcacact
tggcttaagaaaaaaggcgcttgttgtccagttgatggtcaacctttgaaatccgaagat
ctcttcccagatctttataccagtagagagatatctcagaaacgtacaagttgtgtttat
cagcaatttggttgtgaagtaaaattgtctcctgtggatatggaaatgcatatcactcaa
tgcacctataaacaaaatctttcagagcctcaagaaaaaagaactaatgcaatgtctgcg
gagtcaaaattatgggatccacctctaaagaaagggatacaagttgcagacaaagaagaa
ctttcttctgattggcagcaattgctcaaaaatctgtatgaaagaatagtagttttggaa
caggaaaatcgggagctctctataacagtgtctaatcagaaaaatcaactcgcaaatatg
tgtctacgaaattgtaatggagtttacatatggagactgaaatccttccaagaaaaactt
gacactatgatcaacgaccctttaaaaatgttctacagtccaggtttttacacaagccca
aatggatataagatttgcgcgaggattaacatatcatccaaggatcccaattatctgtct
tttgttttacacattatgaaatcagaaaatgatgatgctttggattggccgtttaacggc
acaatgttttttgcattaatacatccgcaagattcagagaaaaacatatgtgatacaacg
tcgtcacaaccagatcttgaggcatttcgaaaacccacgtgcgagttaaataaacgtagc
ttcggttatacagaatttatacgtatacgcgatataaccgattttttgcagcacgatact
ttaatttttagaatagaagttcacccaatatgtttaagatag
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