Solenopsis invicta (red fire ant): 105199434
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Entry
105199434 CDS
T03916
Name
(RefSeq) uncharacterized protein LOC105199434 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105199434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soc03400
]
105199434
Enzymes [BR:
soc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
105199434
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105199434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
105199434
NCBI-ProteinID:
XP_011164862
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All DBs
Position
3:29467056..29493248
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AA seq
467 aa
AA seq
DB search
MTSKLSTFTFNFIINRFLHVSPRCMDVMPPLDLNKLKKRPLEVSERPKKKIDRFDGLSEE
EVQKYTLEDYLEMNLDIVFVGINPSLTAAHRGRYYAGPGNHFYKLLHESGLTPRFVSFEE
DYKLLQYNIGLTNIVSRPTRSAADLKRTELKEGAKIVEEKLRLYKPKIAVFNGKCIYEVF
AHITTKSKFYFGLQPERIDNTAIWVTPSSSARCANFPRMMDKLQFYTALKKYLHFLKGEI
TDVDVKEFCFERCKQIIPSTSKMWRRKNISTFLYGGRVVNKNTLCLDTSEENIALIHTAE
FLVEKTNDEKYDEDENMSINKKTCSQESESQTSFNETIGKIERNMKETEKLLDSGDEVVV
KSKTKRISNINRKKSKNYPIVINNTLNHEDNATNFKNNEKRVSSRIVPKTQNYLKNCNSH
DTDFISIIKQRLSQKSSNDNSACTVSRSKSNSKKNKTVNINDEDTSV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaaactaagtacctttacctttaacttcattataaatcgattcctgcatgta
tctcctcgctgcatggatgtcatgccaccacttgacttgaacaaactcaagaaaagacca
ttagaagtttcggaacgacccaagaaaaagatagacaggttcgatggattgtcagaggag
gaggtacaaaaatatacgttggaagattatctggagatgaatctggacatagtgtttgtc
ggaatcaatccgagtttaacagccgcgcaccgtggtagatattacgcaggtcccggtaat
cacttttacaagttgctacatgaatcgggtctaacgccacgatttgtcagttttgaggaa
gactataaactgttgcaatacaatattggcttgacaaatatcgtatcacgtcctactaga
tctgctgcagatcttaagcgaacagaactcaaagagggtgctaaaatagtggaagaaaaa
ctaagattatacaaacccaaaattgcagtatttaacggtaaatgcatctatgaagtattt
gctcacattactactaaatctaaattttattttggattacaaccagaacgcattgataat
actgcaatttgggtgacaccgtcgagcagcgcacggtgtgctaattttcccagaatgatg
gacaagttgcagttttacacggcattgaaaaagtatctacattttctgaaaggcgaaatt
accgacgtcgatgtaaaggaattctgctttgagagatgcaagcaaattatacccagcact
tccaaaatgtggcgacgcaaaaacatctctacttttctttatggaggtagagttgttaat
aaaaacacgctttgtttagatacatctgaagaaaatattgctttaattcatacagcagaa
tttttagtagaaaaaactaatgatgaaaaatatgatgaagatgagaatatgtctattaat
aagaaaacatgtagtcaagaaagtgaaagtcaaacatcatttaacgaaactataggaaaa
attgagagaaatatgaaagaaacggaaaagcttctagattctggtgatgaagtagtagtt
aagtcaaaaactaaacgaatctctaatattaatagaaaaaaaagtaaaaattatcccatt
gtaattaacaatactttaaatcatgaagataatgcaaccaattttaaaaataatgaaaaa
cgtgtatcttcaagaattgttcccaaaacacaaaattacttgaaaaattgcaatagtcat
gacacagattttataagtataatcaaacaaagattatcacagaaaagtagcaatgataat
agtgcatgcactgtctcaagatcaaaatctaattctaaaaaaaataaaacggtaaatatt
aatgatgaagatacaagtgtataa
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