Sodalis praecaptivus: Sant_2663
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Entry
Sant_2663 CDS
T03004
Symbol
rlmC
Name
(GenBank) 23S rRNA methyluridine methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
sod
Sodalis praecaptivus
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sod03009
]
Sant_2663 (rlmC)
Enzymes [BR:
sod01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
Sant_2663 (rlmC)
Ribosome biogenesis [BR:
sod03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sant_2663 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_11
Cons_hypoth95
Methyltransf_32
Methyltransf_15
TehB
Motif
Other DBs
NCBI-ProteinID:
AHF77691
UniProt:
W0HV04
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All DBs
Position
complement(3086902..3088050)
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AA seq
382 aa
AA seq
DB search
MHCELFTSERCRSCQWLAMPYGQQLAEKQRRLAALLPAVPDDGWQPAMGSAPQGMRNKAK
MVVSGSVERPLLGIADADGGVDLCACPLYPASFAPVFAVVKQFIPRAGLTPYHVARRRGE
LKFLLLTESRHDGAMMLRFVLRSEAKLAQLRAALPWLQARLPQLRVISVNLQPVPMAVLE
GEREIVLTPDRALEERLNQVPLYIRPKSFFQTNPQVAAGLYATARDWVAALPVTRLWDLF
CGVGCFGLHLCRPGMQLTGIEISAEAIASARQSAHQLGLEQVSFQALDSTQFAVQNGEAP
DLVLVNPPRRGIGHDLCAWLSATAPRWILYSSCQAATLVRDLGELEDYRVCRVRLFDMFP
HTAHYETLVLLERRAATPIAAG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgaacttttcacctccgaacgctgccgctcttgccagtggcttgccatgccc
tatggccagcagctcgcggaaaaacagcgccggctggccgcgctgttgcctgccgtaccc
gacgacggttggcagccggcgatgggctccgcgccgcaggggatgcgcaataaagccaaa
atggtggtgagcggcagcgttgagcggccgctactgggcattgccgatgccgatggcggg
gtggacctgtgcgcctgtccgctttatccggccagttttgcgccggtgttcgccgttgtg
aaacagtttatcccgcgcgcggggctgacgccttaccatgtggcgcgtcggcgcggcgaa
ctcaaattcttgctgttgaccgagagccgccatgatggcgcgatgatgctgcgctttgtg
ctgcgttccgaggccaagctggcgcagttacgcgcggccttgccctggctacaggcgcgc
ttgccgcagctgcgggtgatttcggtcaacctacagccggtaccgatggcggtcctcgaa
ggggagcgggaaatcgtgctgacgccggaccgtgcgctggaggagcggcttaaccaggta
ccgctgtatattcggccgaagagcttcttccagaccaacccacaggtcgccgccggcctg
tacgctaccgcccgcgattgggtcgccgcgctgccggtgacgcggctttgggatctgttt
tgcggcgtgggctgcttcggcctgcacctttgccgtcccggcatgcagctgaccggcatt
gaaattagcgcggaggccatcgccagcgcgcgtcagtcggcacatcaattagggttggag
caggtttcgtttcaggcgctggattccacccaatttgccgtgcaaaacggcgaggcgccg
gatttggtgctggtcaatccgccgcggcgcggcatcggccatgacctgtgcgcctggctt
agcgccacggcgccgcgctggatcctgtactccagctgccaggccgcgacgctggtgcgg
gatctcggcgagctggaggattatcgggtgtgccgcgtccggctattcgatatgtttcct
cataccgcccattatgaaacgctggtgctgctggagcgccgcgcggcgacgccgatagcg
gcaggctaa
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