Spinacia oleracea (spinach): 110787251
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Entry
110787251 CDS
T05137
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04075
Plant hormone signal transduction
soe04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110787251
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110787251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soe03000
]
110787251
Transcription factors [BR:
soe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110787251
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
110787251
NCBI-ProteinID:
XP_021847529
UniProt:
A0A9R0JUZ6
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All DBs
Position
4:7489676..7495122
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AA seq
688 aa
AA seq
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MPLTELVNMFKGKMEVPHEVASTSIDPSSRPDTDCVELVWENGQIMMQGNKPRKSNVSSN
FQSFGIKPQDGRNVTNYSKMTKFSTMDSEMVDFPFSVPSCEMGMDQNVDLVPWLNYPMEE
PLHNDYTSDFLNELSGVTISDLLTENHLPYRERKSSFHGDGHETSASLKHINSSSKLFSS
DKKDNRGGSSEVPQFLLPFQHSVPRSGISDITANNADNIHHFGSRDSTLNPSSLSAFTSL
RLQKLDAGQASTTTTSSGFTNFPCFSRPSSVSRANHVTVNPSKRLEYDNKRCTLSSSNPG
SSTLVNLDIGYSQKEIVSHNQSIMAPENGISEALPTKPTEELLSANQPLHREDIANSHAS
QNQVCDAPMSKVGASGDRNMEPVVAASSVCSANSGADRTSNEPARNSKRKSRETTESEGP
SEEIEEESVGAKKSGHGRGGSKRSRAAEVHNQSERRRRDRINEKMRALQELIPNCNKADK
ASMLDEAIEYLKTLQLHVQVLSMGAGLFMHPMMLPPGMLPIHGAHMPHFSPMGLGMGMGM
GMGFGMNMVNMNTGTKMVPYQGSHYPIPGTGPMFHGMPGSNLQTFPHPGQALPMSLQQQA
SIVPASISGSHLKMPMGLNVSGVSHLAPSSIKTDANPQVISMNQATNQASKEGFQQFALC
HNQAQGVNASETAEAANRKDDRNLLPDS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaactgagcttgttaacatgttcaaagggaaaatggaagtcccccatgaagtt
gcctctacttctattgatccttcttctagacctgatactgattgtgttgagctagtttgg
gaaaatggtcagatcatgatgcagggtaataaacctagaaaaagcaatgtctcaagcaat
tttcagtcatttggcatcaagcctcaagatggtaggaatgttactaattattcgaaaatg
accaagtttagtacaatggattctgaaatggttgatttcccattttcagttccttcttgt
gaaatgggtatggatcaaaatgttgacttggtaccttggttaaattatcccatggaagaa
cctttacataatgactacacttctgacttcttgaatgagctatcaggagttacgattagc
gatctccttaccgagaaccatttaccataccgggaaaggaagagtagttttcatggtgac
gggcatgaaacttccgcgagcttgaaacatatcaattcatcatctaagttattttcaagt
gataagaaggataatagaggtggaagtagtgaggtgccacaatttttgttgccatttcag
catagtgtaccaagatcaggtatttctgatattactgctaacaatgcagacaatatccac
cattttggttcacgagactccacgcttaatccatcatcattaagtgcttttaccagcttg
agattgcagaagctagatgcagggcaagctagtactactactactagctcaggttttaca
aattttccctgtttttcgcggccttcttctgtttctagagctaatcatgtgactgtaaac
ccttcgaagagattagagtatgataataaaaggtgtaccttgagtagtagtaatcctggt
agttctactctggttaatttggatattggttattcccaaaaggaaatagtttctcacaac
cagtcgattatggcaccggaaaatggcatttcagaagctttgcccacaaagccaactgag
gagctgctttctgctaatcaacctttacatagagaagacattgctaatagtcacgcgtca
cagaatcaagtgtgtgatgcaccaatgagcaaagtgggtgctagtggtgataggaacatg
gagccagtagttgctgcatcttctgtatgttcagccaatagtggtgcagatagaacttca
aatgagcctgcacgtaattcgaaaaggaaatctcgtgaaactacagaatcagaaggtcct
agtgaagaaatcgaagaggaatcagtgggtgcgaaaaaatcaggtcatggtcgcggtggc
tcaaagagaagccgagctgcagaagtgcataatcaatctgaaaggagaagaagggataga
attaatgagaagatgcgtgcattacaagagctcatacccaactgcaataaggcggacaaa
gcttctatgcttgatgaggctatagagtatttgaagacactacaacttcacgtacaggta
ttgtcaatgggtgctgggttgttcatgcatccgatgatgctaccaccaggaatgttgccc
atccatggagcacacatgccacatttctcacctatggggctcggaatgggaatgggaatg
gggatgggtttcgggatgaacatggtcaacatgaataccggcacgaagatggtaccttat
caagggtcacattaccctatccctggaaccggacccatgtttcacgggatgccgggttct
aatcttcagacttttccgcatcctggtcaagcattacctatgtcccttcaacaacaagct
tctatagttcccgcttcaatttcaggaagtcatttgaagatgccgatgggattaaatgtt
tctggtgtgtcacatttagctccatctagtattaaaacggatgctaacccacaagtgatt
tccatgaatcaggcaactaatcaggcatcaaaagagggtttccagcagtttgctttgtgc
cataatcaagctcaaggtgttaatgcctcagaaactgctgaagctgccaacagaaaagat
gacaggaacctgttacctgactcttaa
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