Spinacia oleracea (spinach): 110804025
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Entry
110804025 CDS
T05137
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03420
Nucleotide excision repair
soe04120
Ubiquitin mediated proteolysis
soe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110804025
04120 Ubiquitin mediated proteolysis
110804025
09124 Replication and repair
03420 Nucleotide excision repair
110804025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110804025
03400 DNA repair and recombination proteins [BR:
soe03400
]
110804025
Enzymes [BR:
soe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
110804025
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110804025
Multi subunit type E3
SCF complex
Ring finger protein
110804025
Cul2 complex
110804025
Cul3 complex
110804025
Cul4 complex
110804025
Cul7 complex
110804025
Cul8 complex
110804025
Cul9 complex
110804025
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
110804025
TCR (transcription coupled repair) factors
Cul4-CSA complex
110804025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
110804025
NCBI-ProteinID:
XP_021865274
UniProt:
A0A9R0JCB3
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All DBs
Position
1:complement(131054991..131058626)
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AA seq
114 aa
AA seq
DB search
MDSDVVMVPAGEGSSTGAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCI
ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggattccgacgtagttatggttcccgccggcgagggttctagcaccggagccggccct
tcttctaagaaacctaagcgtttcgagatcaaaaaatggaacgctgtcgctctttgggct
tgggatattgttgtcgacaattgtgcaatttgtcgtaatcatatcatggatctatgtatt
gaatgccaagctaatcaagctagtgctacgagtgaggagtgcactgtcgcttggggtgtc
tgcaaccatgccttccatttccattgcatcagccgttggttaaaaactcgacaagtatgc
ccattagataatagtgagtgggagtttcagaaatatggacattag
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