Serratia odorifera: NCTC11214_04582
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Entry
NCTC11214_04582 CDS
T06612
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sof
Serratia odorifera
Pathway
sof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11214_04582 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sof03400
]
NCTC11214_04582 (nth)
Enzymes [BR:
sof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC11214_04582 (nth)
DNA repair and recombination proteins [BR:
sof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11214_04582 (nth)
Prokaryotic type
NCTC11214_04582 (nth)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
VDZ63672
UniProt:
A0A447KZK0
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All DBs
Position
1:4210599..4211240
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AA seq
213 aa
AA seq
DB search
MNKQKRLEILTRLRDNNPHPTTELVFTTPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PAAMLALGVDGVKEYIKTIGLFNSKAENVIKTCRILLEQHGGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTRFAPGNTVEQVEDKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYKEKVYPDA
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaaaaacgcctggaaattctgacccgtttacgcgacaacaacccgcacccg
actaccgaactggtatttaccacgccgtttgaactgctgatcgccgtgctgttgtcggca
caggcgaccgacgtcagcgtcaacaaggccaccgccaagctgtatccggtggccaatacg
ccagcggcgatgctggcgctgggggtcgacggcgtcaaggaatacatcaagaccatcggc
ctgttcaatagcaaggccgagaatgtgatcaaaacctgccgtatcctgctggaacagcat
ggcggcgaggtgccagaggatcgcgcggcactcgaggcgttgcccggcgttggtcgaaaa
acagcaaacgtggtgttgaataccgcctttggctggcccaccattgcggtagatacccac
atcttccgcgtcagcaatcggacgcgcttcgcaccgggtaataccgtcgaacaggttgaa
gacaagctgctgaaagtagtgccggcggaattcaaggtcgactgccatcactggttgatc
ctgcatggtcgttatacctgtatcgcccgcaaaccgcgctgcggttcctgcatcatcgaa
gatctttgcgaatacaaggaaaaggtctatcccgacgcctga
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