Serratia odorifera: NCTC11214_05244
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Entry
NCTC11214_05244 CDS
T06612
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sof03009
]
NCTC11214_05244 (rlmC)
Enzymes [BR:
sof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
NCTC11214_05244 (rlmC)
Ribosome biogenesis [BR:
sof03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC11214_05244 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_ANTKMT
Cons_hypoth95
Methyltransf_12
Methyltransf_11
Methyltransf_37
Motif
Other DBs
NCBI-ProteinID:
VDZ64971
LinkDB
All DBs
Position
1:complement(4808586..4809713)
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AA seq
375 aa
AA seq
DB search
MHCALYTAGSCRSCQWLEKPYSQQLADKQHHLQTLLAGRQVAQWLAPAAGQQGAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLCACPLYPASFAPMLTLLKTFIARAGLTPYNVARKRG
ELKYLLLTESTLNGEVMLRFVLRSESKLTQLRAALPWLQQRLPQATVISANIQPVHMAIL
EGEREIPLTERQALEERFNQVPLYIRPQSFFQTNPQVAADLYATARDWVQALAIDSMWDL
FCGVGGFGLHCARAQTRLTGIEINAEAIACARQSAAALGLRQVNFQALDSTHFATAEGEV
PQLVLVNPPRRGIGQALCDYLHRMAPDYILYSSCNAQSMAKDLAMLPDYRIERVQLFDMF
PHTAHYEVLTLLVRG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcgttgtacacggcgggcagctgtcgttcctgccagtggctggaaaagcct
tattcgcagcaactggctgacaaacagcatcacctgcaaacgctgctggccgggcgccag
gtggcgcaatggctggcgcccgccgcgggtcaacagggcgcttttcgtaataaagccaaa
atggtggtcagcggcagcgtagagcgcccgctgttaggcatgctgcaccgtgacggcacg
ccggtggatttatgcgcctgcccactgtatcccgccagcttcgcgccgatgttgacgcta
ctgaaaacgtttatcgctcgcgccggtttgaccccgtacaacgttgctcgtaaacgtggc
gaactaaagtatctgttattgaccgaaagcacgctgaacggcgaggtgatgctgcgattt
gtcttgcgctcggaaagcaaattgacgcagctgcgtgccgctttgccatggttgcagcaa
cgtttgccacaggcgacggtgatttccgccaatattcagccggtgcatatggcgatcctg
gaaggcgagcgggaaatcccgctgaccgagcgacaggcgctggaagagcggtttaaccag
gtgccgctgtatattcgcccgcaaagtttcttccaaaccaatccgcaggtagcggccgat
ctgtatgctaccgcgcgtgactgggtgcaggcgctggctattgacagcatgtgggatctg
ttctgcggcgtcggcggctttggactgcactgcgcccgcgcgcaaacgcgtcttaccggt
attgaaatcaatgccgaagccattgcctgcgcgcggcaatcggcggcggcgctgggctta
cgtcaggttaatttccaggcattggattccacccattttgccaccgccgaaggcgaggta
ccgcagctggtactggtgaacccgcccagacgcggtatcggccaggcgctgtgcgactat
ctgcaccgtatggcaccggactatattctgtattcaagctgtaacgcgcagagtatggca
aaagatctggcgatgctgccagactaccggatcgaacgcgtgcagctgttcgacatgttc
ccgcataccgcgcattatgaagtgttgaccctgctggtgcgcggttaa
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