Shewanella oncorhynchi: RA178_08125
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Entry
RA178_08125 CDS
T09381
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sog
Shewanella oncorhynchi
Pathway
sog01501
beta-Lactam resistance
sog01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RA178_08125
01503 Cationic antimicrobial peptide (CAMP) resistance
RA178_08125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sog03036
]
RA178_08125
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_08125
01504 Antimicrobial resistance genes [BR:
sog01504
]
RA178_08125
Chromosome and associated proteins [BR:
sog03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RA178_08125
Transporters [BR:
sog02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RA178_08125
Antimicrobial resistance genes [BR:
sog01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RA178_08125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
GCV_H
NQRA_N
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
WMB74555
UniProt:
A0AA50KGB3
LinkDB
All DBs
Position
complement(1785667..1786680)
Genome browser
AA seq
337 aa
AA seq
DB search
MTSISRAFFLLLALSSTQAQAASVETIEVLNKPYPNWVTLDATIEAVKAATVSAQTSGRI
VKLNYDVNDVVPEGAALLEITSKEQGAELASFEADLAKAKALNVEAQAQYKRYKELFPQG
AISKGAMDEATANAKATEQAVSAAQARVIKANESLKYTVVSAPFSGIVTERFVELGETVS
PGQALLSGFSASQMRAITQVPQRYINQLKNSPKFLVRLSDGREFTSTDLTIFSFADPVSH
SYQVRINLPENEANLQPGTWAKASFKNGDREKIQLPASALLTMNELSSVYLKQGEAFVLT
QVRVTEPLDGEVEVLAGLKSGDKVAVDAYQVLLSKKQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatttctcgtgcttttttcttactgcttgcactttccagtactcaagctcag
gctgcctcagtcgaaaccatcgaagtcttaaataaaccctatccgaattgggtcacctta
gacgccaccattgaagcagtaaaagcagcgacggtatcggcgcaaacctctggccgtatt
gtcaaactcaactacgatgttaacgatgtcgtccccgaaggagccgccctactggaaatt
accagtaaagagcaaggcgctgaactggcaagctttgaggctgatctagccaaagcgaag
gctttaaatgtcgaagctcaggcacaatacaaacgttataaagagctatttccccaaggc
gcgatttctaagggcgcgatggatgaagccaccgccaatgctaaagcaacagaacaagcc
gtcagtgcagcacaagcccgtgtcatcaaagccaacgaatccctaaaatacactgtcgtt
tcagcgccttttagtggcatagtcactgagcgttttgtcgaacttggcgaaacagtaagc
ccaggacaagcactactttcagggttttccgcgagtcaaatgcgcgccattacccaagtg
ccacagcgttatattaaccaacttaaaaattcccccaaatttctcgtccgtttaagtgat
gggcgcgagttcacctcaactgacctcacgattttcagtttcgccgatcccgtcagccac
agttatcaagtgcgaattaatctgccagaaaatgaagccaatcttcaacccggtacttgg
gcaaaagcttcctttaaaaatggcgatcgggaaaaaatccaactgcccgcctctgcactg
ctcacaatgaacgaactgagcagtgtttaccttaaacaaggcgaagcctttgtgctgacc
caagtccgtgtcactgagcccttagatggcgaggtagaagtgcttgcgggccttaagtcg
ggtgacaaggtggccgttgatgcctaccaagtgttgctcagcaagaagcaataa
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