Shewanella oncorhynchi: RA178_10020
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Entry
RA178_10020 CDS
T09381
Name
(GenBank) sensor histidine kinase
KO
K07637
two-component system, OmpR family, sensor histidine kinase PhoQ [EC:
2.7.13.3
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog01503
Cationic antimicrobial peptide (CAMP) resistance
sog02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA178_10020
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RA178_10020
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sog01001
]
RA178_10020
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sog02022
]
RA178_10020
01504 Antimicrobial resistance genes [BR:
sog01504
]
RA178_10020
Enzymes [BR:
sog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RA178_10020
Protein kinases [BR:
sog01001
]
Histidine kinases
OmpR family
RA178_10020
Two-component system [BR:
sog02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
RA178_10020
Antimicrobial resistance genes [BR:
sog01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
RA178_10020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HATPase_c_5
DUF6377
ANIS5_cation-bd
HATPase_c_2
Ferric_reduct
HAMP
FlgN
Far-17a_AIG1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
WMB74907
UniProt:
A0AA50KH64
LinkDB
All DBs
Position
complement(2196311..2197660)
Genome browser
AA seq
449 aa
AA seq
DB search
MQLRLKFKKRLLTRMFLTSLSIITLVGFGLAWMVNILHAQNSYNEETAQLIAEIPQVAAE
LREHDLIPDTSAWLEENNKQERYVIASCDDKFKQVWTSSLAVDRGLFDTCERFNEIRNDS
PPYYLTMADDRGYFVYLLAVEIASVHYNLLVMKDAAKLEQEYSKFSKRTYIRLAMVLALA
LILLVSAAYWGMRPLVRMQNELQSINQGKSKSLSEGYPVELEGVTQALNQMLQQSSAQQQ
RYQNAMNDLAHSLKTRLAAVHAITDDASLSKQSASEKIMEQVSQMDQLVKYQLKRAMLGR
QGLKQEQTVIAPLVDQLAQMLFKIYREKQVQFSANISPSLMFPGNKGDLMELCGNLMENA
FRLCISQVHVSAKINSQGEFELIVEDDGPGVEESLRQKIIQRGVRADTQSPGQGIGLAVC
DEIVHSYGGSLKIEESRLEGALFRIRIPV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaagattaaaattcaagaaacgtctgctgacacggatgtttctcacctcacta
tcaattattaccttagtgggttttggtctcgcatggatggttaatattctgcatgcgcaa
aatagttataacgaagaaacggcccaactcattgccgaaattccccaagtcgccgccgaa
ttacgggagcacgatcttatccccgataccagtgcttggttggaagaaaataataaacaa
gagcgttatgtgatagcgagttgcgatgacaaatttaagcaggtttggacctcatccctc
gcagtagatcgtggcttatttgatacctgtgagcgttttaacgaaatccgtaacgactcc
ccgccctactacctcaccatggctgacgatagaggatatttcgtctatttgctcgcggta
gaaattgccagtgtgcattacaacctcctcgtcatgaaagatgccgccaaactggagcaa
gaatacagtaagttcagtaaacgtacttatattcgtttagccatggtattggccttagcc
ttaattctattggtcagcgccgcctattggggcatgcgtcccttggtacggatgcaaaat
gaactgcaatcaattaaccaagggaagagtaaatcactttctgagggctatcctgttgaa
cttgaaggcgtaacgcaagcactcaaccagatgttgcaacaatcgagtgcccaacaacag
cgctatcaaaatgctatgaatgacttggcacacagtcttaaaacccgcttagccgccgtg
catgccattacagatgacgccagtttgagtaaacaatcggcaagcgaaaagatcatggaa
caagtcagccaaatggatcagctggtcaaataccaattaaaacgggccatgttaggccga
caaggcctgaagcaagaacaaactgttattgcgcccttagtcgatcaattagcacaaatg
ttgtttaaaatttatcgagaaaaacaagtgcagttctcggccaacatatccccctctttg
atgttccccggcaacaagggtgacttaatggagctgtgtggcaaccttatggaaaatgct
ttccgcctgtgtatcagccaagtgcatgtatcggctaaaattaactcacaaggtgagttt
gaactcattgttgaagatgatggcccaggtgttgaagaaagcttaagacagaagattatc
caacgtggcgtgcgtgccgatactcagtccccagggcaagggatcggattagctgtctgt
gatgaaatcgttcacagctacggtggcagcttaaaaattgaagaaagtcgcttagaaggg
gcgctctttaggatccgtatcccagtgtaa
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