Shewanella oncorhynchi: RA178_10025
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Entry
RA178_10025 CDS
T09381
Name
(GenBank) response regulator
KO
K07660
two-component system, OmpR family, response regulator PhoP
Organism
sog
Shewanella oncorhynchi
Pathway
sog01503
Cationic antimicrobial peptide (CAMP) resistance
sog02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA178_10025
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RA178_10025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sog02022
]
RA178_10025
01504 Antimicrobial resistance genes [BR:
sog01504
]
RA178_10025
Two-component system [BR:
sog02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
RA178_10025
Antimicrobial resistance genes [BR:
sog01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
RA178_10025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
FleQ
Motif
Other DBs
NCBI-ProteinID:
WMB74908
UniProt:
A0AA50KGW7
LinkDB
All DBs
Position
complement(2197651..2198325)
Genome browser
AA seq
224 aa
AA seq
DB search
MRILVVEDDPILSHHLKVQLSDLGNQVQVALTAKEGFYQATNYPIDVAIVDLGLPDQDGI
SLIQQLREAGLKAPILILTARVNWQDKVEGLNAGADDYLVKPFQKEELVARLDALVRRSA
GFVKPVICSGELKLDLAAKQVTLGDEVMEVTAFEYLILEYLMRHCHEVVAKQRLLDVIYG
DKEGDPNTIEVMVSRLRKKLTRDGIDTPIVTIRGQGYKFNLPCN
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttggttgttgaagacgatcctattttatcccaccacttaaaagtgcaatta
agcgatctcggcaatcaagttcaagtggcactgactgccaaagaaggtttttatcaagcc
actaattatcccatcgatgtagccattgtcgatttagggctacccgatcaagatggtatt
agcttaattcaacaactccgtgaagcgggtcttaaagcaccgatattaattctcacggca
cgagttaattggcaggataaagttgaaggccttaacgccggagccgatgactatttagtg
aaaccctttcaaaaagaagagcttgtcgcaaggcttgatgccttagtgcgacgtagcgca
ggttttgttaaacccgtgatttgcagtggagaattgaaactcgatctcgccgccaaacaa
gtcactctgggtgacgaagtcatggaggtcactgcctttgaatatttaatcctcgaatat
ttgatgcgccattgtcatgaggttgtcgccaagcaacgtttactcgatgtgatttatggt
gataaggaaggcgatcccaatacgattgaagttatggtcagccgcttgcgtaaaaaactg
acccgcgatggtatcgatacccccatagtgaccatccgcggccaaggatataaatttaac
ctgccatgcaattaa
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