Shewanella oncorhynchi: RA178_11825
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Entry
RA178_11825 CDS
T09381
Symbol
yfbR
Name
(GenBank) 5'-deoxynucleotidase
KO
K08722
5'-deoxynucleotidase [EC:
3.1.3.89
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00230
Purine metabolism
sog00240
Pyrimidine metabolism
sog01100
Metabolic pathways
sog01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RA178_11825 (yfbR)
00240 Pyrimidine metabolism
RA178_11825 (yfbR)
Enzymes [BR:
sog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.89 5'-deoxynucleotidase
RA178_11825 (yfbR)
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Gene cluster
GFIT
Motif
Pfam:
YfbR-like
HD_3
HD
T26-6p_Ig-like_dom_2
OS-D
Motif
Other DBs
NCBI-ProteinID:
WMB71141
UniProt:
A0AA50KAH7
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All DBs
Position
2614030..2614617
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AA seq
195 aa
AA seq
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MSHLFAHLARMKLIQRWPLMYNVRTENVQEHSLQVAMVAHALVIISNKKFGTTLDPHQAT
SLAIFHDASEILTGDLPTPVKYFNKEIEAEYKKIEAIAEQRMLDMVPEEFKEDYRNLFIS
DYADPVYKTIVKSADTLCAYLKCLEENRAGNSEFNTARKRLEDMLATNPDPAVQYFMNCF
VPSFTLNLDEINKML
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatttatttgcgcatttagctcgcatgaaacttatccaacgctggcctttgatg
tacaacgttcgcactgaaaatgttcaagaacactcgctacaagttgctatggtggcccat
gcactggtgatcatcagcaataaaaagttcggcacgacgctcgatccccatcaagccacc
agtttggcgatttttcacgatgccagtgaaattctcacgggtgacttaccgacgccggtg
aaatacttcaataaagaaattgaagccgagtataaaaagattgaggcgattgccgagcag
cgcatgttagatatggtacctgaggaatttaaagaagattatcgcaatctgttcatcagc
gattacgccgatcccgtttacaagaccatagttaaatccgccgatactctgtgcgcttac
cttaaatgccttgaagaaaaccgcgccggcaacagtgaattcaataccgcccgcaagcga
cttgaagacatgctggcgacgaatcccgatcctgcagtacagtattttatgaactgcttt
gtacccagtttcaccttgaatttagacgaaattaacaagatgctttga
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