Shewanella oncorhynchi: RA178_21450
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Entry
RA178_21450 CDS
T09381
Name
(GenBank) ATP-binding protein
KO
K07637
two-component system, OmpR family, sensor histidine kinase PhoQ [EC:
2.7.13.3
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog01503
Cationic antimicrobial peptide (CAMP) resistance
sog02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA178_21450
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RA178_21450
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sog01001
]
RA178_21450
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sog02022
]
RA178_21450
01504 Antimicrobial resistance genes [BR:
sog01504
]
RA178_21450
Enzymes [BR:
sog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RA178_21450
Protein kinases [BR:
sog01001
]
Histidine kinases
OmpR family
RA178_21450
Two-component system [BR:
sog02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
RA178_21450
Antimicrobial resistance genes [BR:
sog01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
RA178_21450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
HAMP_PhoQ
HATPase_c_5
HisKA
HATPase_c_2
HATPase_c_3
Abi_alpha
HAMP
Motif
Other DBs
NCBI-ProteinID:
WMB72932
LinkDB
All DBs
Position
4874075..4875439
Genome browser
AA seq
454 aa
AA seq
DB search
MSKRAMAWQVLNSLKARLVASALLFILVLLPLIGVALNDAFTEQVKSATKNELSAYVYSI
LAVTEVENKQISIPELVLENRFNLIQSGLYAIATTEDASGKQDIVWHSQSFMGITPPPHF
TIPATGQSAFEQIELADQLHLIYSFSVSFASQNQNVPVTIHIIKDEREFQQQIDQFNQQL
WTWLLILMLVMLVFQLSWLLWTLRPLARFTQELHSVEQGKSMQLSSQYPTELQAVARQLN
ILLNTEQTQRKRYRNALADLAHSLKTPLAVIKSQADLSESSSEQVSVISRIIGHQLKRAQ
TAAAASWHLGIRVDEVAAKLLRTLAKIYREPQINLSGEMVEHAVFKGDEADLTEILGNLL
DNACKAAKSTVTLTVTGDAYQLLICIEDDGPGISEALQNQIFERGIRADSYLQGNGIGLA
IVRDLVDSYNGRISVSRSETLGGAKFSISFAHSV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacgcgccatggcgtggcaagtgttgaactccctaaaagcacgcttagttgcc
agcgcgctattatttatcttagtgttattacccttgatcggcgttgccttaaacgatgcc
tttactgaacaagttaaaagcgcaaccaagaatgaactcagtgcctatgtctattcgatt
ctcgcggtgactgaagtcgaaaacaaacaaatctccatcccagagttagtgttagagaat
cgttttaacctcattcaatcagggctgtatgccattgcaaccactgaagacgccagcggc
aaacaagatatagtgtggcattcgcaatcttttatggggattacgccaccgccacatttt
accatcccagccacgggtcaaagcgcatttgagcaaatcgagctcgccgatcaactccat
ttgatttatagctttagtgtcagttttgccagccaaaatcaaaacgtgcctgtgacaatc
cacattattaaagacgagcgagaatttcagcagcaaattgatcagtttaatcaacagctt
tggacttggctgctgatcttaatgttagtcatgttagtgtttcaattaagttggttactg
tggacgttacggcctttagcacgctttacccaagagttacattccgtcgagcaaggtaaa
tcgatgcagctaagtagccagtaccccactgaattacaagcggttgctcggcagcttaat
attttgctcaataccgaacaaacccaacgaaaacgctatcgtaatgccttggccgaccta
gcccatagcctcaaaacaccactggcggtgatcaagagtcaggccgacttaagcgaatcc
tccagtgagcaagtatcagtgatcagccggatcattggccaccagctaaaacgcgcccaa
actgcagcggcggcctcgtggcatttaggtattcgtgtcgatgaagtcgccgctaagtta
ttacgcaccttagctaaaatttatcgagagccacaaatcaatctcagcggcgagatggta
gaacacgcagtattcaagggggatgaagcagatctgactgaaattctaggtaatttactc
gacaacgcctgtaaagccgcgaagtctacggtgacattaacggtcacaggcgatgcctat
caactgctaatctgtatcgaagatgatggcccagggatcagtgaagccctgcaaaatcaa
atctttgaacgtggtattcgcgcggactcctaccttcaaggtaatggtattgggcttgct
atcgtgcgcgatttagtcgacagctataacggcagaatttctgtctctcgttcagaaacc
ttaggtggtgccaaatttagcatcagctttgcacactcagtttaa
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