Shinella oryzae: K6301_09015
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Entry
K6301_09015 CDS
T08112
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
soj
Shinella oryzae
Pathway
soj01501
beta-Lactam resistance
soj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K6301_09015
01503 Cationic antimicrobial peptide (CAMP) resistance
K6301_09015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soj03036
]
K6301_09015
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_09015
01504 Antimicrobial resistance genes [BR:
soj01504
]
K6301_09015
Chromosome and associated proteins [BR:
soj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K6301_09015
Transporters [BR:
soj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K6301_09015
Antimicrobial resistance genes [BR:
soj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K6301_09015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
UPA23341
LinkDB
All DBs
Position
complement(1819394..1820560)
Genome browser
AA seq
388 aa
AA seq
DB search
MRVWKQLLLGVGVITAGVLLWGRFVPGANGVLEAAGLPETVVAAIAPAGEGNGQAGGEGG
GRSGGFGGGPALVVTKPVAMALVNDRLNAIGDGEAIRSVTVTPYATGNLTEVLVQSGSRV
EQGQVIARLDNDEQKIAADQARVARESAAQKVTRLTNLRSSTSAADLQDAETALKAAELA
LRNAELMLSRRDITAPFAGTVGIISVNPGDYVTTTSAIARVDDRSKILVDYWVPERFATN
IRVGGEVTATAVARPGETFTGTIQAIDNRIDQESRTLRVRAQIENPQDLLRAGMSFQVTM
HFAGDRYPSVDPLSVQWSADGSFIWRVSGDKVERVPVHIVQRNPDKVLVKADLADGDAVV
VEGVQTLRPGGAVRTAAERQAPAGTEGS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtttggaaacagctccttcttggcgtcggcgtcattacggccggcgtgctgctt
tggggccgtttcgtgccgggtgcgaacggtgttctggaggccgccggcctgccggagacg
gtggtcgctgcgattgcgccggccggtgagggcaacgggcaggcgggcggcgaaggcggc
ggcaggagcggtggcttcggcggcggcccggcgctcgtggtgaccaagcccgtcgccatg
gcgctcgtcaacgaccggctgaatgccatcggcgacggcgaggcgatccgctcggtgacg
gtaacgccctatgccaccggcaacctgacggaggttctcgttcaatccggcagccgggtg
gagcaggggcaggtgatcgcccgcctcgacaatgacgagcagaagatcgcggccgatcag
gcccgtgtggctcgtgaaagcgctgcccaaaaggtgacgcgcctgaccaacctgcgctcc
tcgaccagcgcggccgatctgcaggatgccgagaccgcgctgaaggccgcggagctggcc
ttgcgcaacgccgaactcatgctcagccggcgcgacatcaccgcgcccttcgccggcacg
gtcggcatcatctcggtcaatcccggtgattacgtcacgaccacgtccgccatcgcacgc
gtcgacgaccgctcgaagatcctcgtcgattactgggtgccggagcgcttcgcgacgaac
atccgcgtgggcggtgaagtcacggccaccgccgtggcgcgtccgggtgaaaccttcacc
ggcaccattcaggcgatcgacaaccgtatcgaccaggaaagccgcacgctgcgcgtgcgc
gcccagatcgaaaacccgcaggatctgctgcgcgcgggcatgtccttccaggtgacgatg
cattttgccggcgaccgctatccgagcgtcgatccgctttccgtgcagtggagcgcggac
gggtcgttcatctggcgcgtcagcggcgacaaggtggagcgcgtgcccgtgcatatcgtc
cagcgcaatcccgacaaggtgctcgtgaaggccgacctcgccgatggcgatgccgtcgtc
gtcgaaggcgtgcagacgctcaggccgggcggcgcggtgcgcactgccgcggagcgacag
gcccccgccggcacggagggttcgtga
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