Shinella oryzae: K6301_11105
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Entry
K6301_11105 CDS
T08112
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
soj
Shinella oryzae
Pathway
soj01501
beta-Lactam resistance
soj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K6301_11105
01503 Cationic antimicrobial peptide (CAMP) resistance
K6301_11105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soj03036
]
K6301_11105
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_11105
01504 Antimicrobial resistance genes [BR:
soj01504
]
K6301_11105
Chromosome and associated proteins [BR:
soj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K6301_11105
Transporters [BR:
soj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K6301_11105
Antimicrobial resistance genes [BR:
soj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K6301_11105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
VIT_2
Biotin_lipoyl_2
OEP
Motif
Other DBs
NCBI-ProteinID:
UPA23732
LinkDB
All DBs
Position
2262099..2263286
Genome browser
AA seq
395 aa
AA seq
DB search
MRFISAAVVMAVAQTSAFAADAATSSVDGAQQVQNLPAIVVTAAEQRSLVDRVIATGTIQ
AVEEVYVTPLVEGLSIRTLEADVGDRVAADGTLATLNDDALLLQKSQTEASLAKARAGLE
QIKAQLVEAKANADEAVRARDRAQRLVKSGSQSQAGADQAIAAADAALARVNSAEQAVAV
AEADINVAQSQIDDIDLRLARTSVKSPVAGVVSARTAKIGAIASGSASPLFTVIRDGAIE
LKADVSEDTILKLKPGLKAKVSLAGGAATLTGTIRLVEPTLDPQSRLGRVYIGFDKPERA
RAGMFASADIVVEEKQGIVLPLSAVTTADGKTVARKVENGVVRLVPVETGIQDGQGIEIV
SGLAAGDEVVAKAGAYVRDGDRINPVKGEQASATK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcatttctgccgcggtcgtaatggctgtcgcgcagacatccgcttttgccgcc
gatgcggcgaccagcagtgtcgatggcgcccagcaggtccagaacctgcccgccattgtc
gttaccgctgccgaacagcgcagcctcgtcgatcgcgtgatcgccaccggcacgatccag
gccgtcgaggaagtctacgtgacgccgctcgtcgaaggcctctcgatccgcacgcttgaa
gccgatgtcggcgatcgcgtcgcggcggacggcacgctcgccacgctgaacgacgatgcg
ctccttctccagaaaagccagaccgaggcttcgcttgccaaggcacgcgccggcctcgaa
cagatcaaggcacagctcgtggaagcgaaggccaatgcggacgaggccgtccgggcccgc
gaccgcgcgcagcggcttgtgaagtccggctcccagtcgcaggccggtgccgaccaggcg
attgcggcagcggacgcagcacttgcccgcgtcaattccgccgagcaggctgtcgccgtc
gccgaggccgacatcaatgtcgcgcagtcgcagatcgacgatatcgacctgaggcttgcc
cgcacctccgtcaagtcgccggtcgccggcgtcgtgtccgcgcgcaccgccaagatcggc
gccatcgccagcggatcggcctcgccgctcttcaccgtcatccgcgacggcgccatcgaa
ctcaaggccgacgtatcggaagacacgatcctcaagctcaagcccggcctcaaggccaag
gtctcgcttgcgggcggagcggcgacgctgaccggcaccatccgcctggtcgaaccgacg
ctcgatccgcaaagccgcctcggccgcgtctatatcggcttcgacaagccggagcgggcc
cgcgccggcatgtttgcgagcgccgacattgtcgtggaggaaaagcagggtattgtcctt
cccctctccgccgtcacgacggcggacggcaagacggtggcccgaaaggtcgagaacggt
gtcgtccggctggtgccggtcgagaccggcattcaggacggccaggggatcgagatcgtc
agcgggcttgcagccggcgacgaggtcgtcgccaaggccggcgcctatgttcgcgatggc
gaccggatcaatccggtcaagggcgaacaggcttcggccacgaaatga
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